Information for 1-NTGTTTACWTWGY (Motif 1)

G C A T C G A T C T A G A C G T A C G T C A G T C T G A A G T C G C A T G A C T C G A T A C T G G A T C
Reverse Opposite:
C T A G T G A C G C T A C T G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A
p-value:1e-259
log p-value:-5.984e+02
Information Content per bp:1.645
Number of Target Sequences with motif462.0
Percentage of Target Sequences with motif61.44%
Number of Background Sequences with motif4656.6
Percentage of Background Sequences with motif9.96%
Average Position of motif in Targets51.4 +/- 17.8bp
Average Position of motif in Background49.9 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:NTGTTTACWTWGY
-TGTTTACTTT--
 G C A T C G A T C T A G A C G T A C G T C A G T C T G A A G T C G C A T G A C T C G A T A C T G G A T C
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:NTGTTTACWTWGY
-TGTTTACTTT--
 G C A T C G A T C T A G A C G T A C G T C A G T C T G A A G T C G C A T G A C T C G A T A C T G G A T C
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.98
Offset:-3
Orientation:forward strand
Alignment:---NTGTTTACWTWGY
TCCATGTTTACTTTG-
 A C G T A C G T A C G T G C A T C G A T C T A G A C G T A C G T C A G T C T G A A G T C G C A T G A C T C G A T A C T G G A T C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.98
Offset:1
Orientation:forward strand
Alignment:NTGTTTACWTWGY
-TGTTTACTTAGG
 G C A T C G A T C T A G A C G T A C G T C A G T C T G A A G T C G C A T G A C T C G A T A C T G G A T C
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--NTGTTTACWTWGY
BSNTGTTTACWYWGN
 A C G T A C G T G C A T C G A T C T A G A C G T A C G T C A G T C T G A A G T C G C A T G A C T C G A T A C T G G A T C
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-NTGTTTACWTWGY
CNTGTTTACATA--
 A C G T G C A T C G A T C T A G A C G T A C G T C A G T C T G A A G T C G C A T G A C T C G A T A C T G G A T C
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NTGTTTACWTWGY
-TRTTTACTTW--
 G C A T C G A T C T A G A C G T A C G T C A G T C T G A A G T C G C A T G A C T C G A T A C T G G A T C
A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-NTGTTTACWTWGY
TTTGTTTACTTA--
 A C G T G C A T C G A T C T A G A C G T A C G T C A G T C T G A A G T C G C A T G A C T C G A T A C T G G A T C
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T

FOXI1/MA0042.2/Jaspar

Match Rank:9
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:NTGTTTACWTWGY
-TGTTTAC-----
 G C A T C G A T C T A G A C G T A C G T C A G T C T G A A G T C G C A T G A C T C G A T A C T G G A T C
A C G T A G C T C T A G G C A T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-NTGTTTACWTWGY
TNTGTTTACTT---
 A C G T G C A T C G A T C T A G A C G T A C G T C A G T C T G A A G T C G C A T G A C T C G A T A C T G G A T C
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T A C G T A C G T