Information for 13-GGYAGATKGYCWT (Motif 19)

C A T G T C A G A G C T C G T A C T A G G C T A G C A T C A T G C A T G G A T C G T A C G C T A C G A T
Reverse Opposite:
G C T A C G A T C A T G C T A G G T A C G T A C C G T A C G A T G A T C C G A T T C G A A G T C G T A C
p-value:1e-10
log p-value:-2.355e+01
Information Content per bp:1.502
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets62.8 +/- 29.6bp
Average Position of motif in Background46.3 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGYAGATKGYCWT
AACAGATGGC---
 C A T G T C A G A G C T C G T A C T A G G C T A G C A T C A T G C A T G G A T C G T A C G C T A C G A T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGYAGATKGYCWT
AACAGATGGT---
 C A T G T C A G A G C T C G T A C T A G G C T A G C A T C A T G C A T G G A T C G T A C G C T A C G A T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGYAGATKGYCWT-
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T C A T G T C A G A G C T C G T A C T A G G C T A G C A T C A T G C A T G G A T C G T A C G C T A C G A T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGYAGATKGYCWT----
--NAGATWNBNATCTNN
 C A T G T C A G A G C T C G T A C T A G G C T A G C A T C A T G C A T G G A T C G T A C G C T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGYAGATKGYCWT
-GTTAATGGCC--
 C A T G T C A G A G C T C G T A C T A G G C T A G C A T C A T G C A T G G A T C G T A C G C T A C G A T
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGYAGATKGYCWT
AACAKATGGY---
 C A T G T C A G A G C T C G T A C T A G G C T A G C A T C A T G C A T G G A T C G T A C G C T A C G A T
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGYAGATKGYCWT
VNAVCAGCTGGC---
 A C G T A C G T C A T G T C A G A G C T C G T A C T A G G C T A G C A T C A T G C A T G G A T C G T A C G C T A C G A T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGYAGATKGYCWT
AACAGATGGTCN-
 C A T G T C A G A G C T C G T A C T A G G C T A G C A T C A T G C A T G G A T C G T A C G C T A C G A T
C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGYAGATKGYCWT
--TTGATTGN---
 C A T G T C A G A G C T C G T A C T A G G C T A G C A T C A T G C A T G G A T C G T A C G C T A C G A T
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGYAGATKGYCWT
--AAGATATCCTT
 C A T G T C A G A G C T C G T A C T A G G C T A G C A T C A T G C A T G G A T C G T A C G C T A C G A T
A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T