Information for 11-TAGGCAGGCTGGCTCC (Motif 15)

A C G T C T G A A T C G C T A G A T G C C G T A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A C G T A G T C A T G C
Reverse Opposite:
A T C G A C T G G T C A C T A G G T A C A G T C C G T A A T C G A G T C A G T C A C G T A T C G A G T C A T G C G A C T C G T A
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.883
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.6 +/- 12.5bp
Average Position of motif in Background67.3 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TAGGCAGGCTGGCTCC-
----CTGTCTGTCACCT
 A C G T C T G A A T C G C T A G A T G C C G T A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A C G T A G T C A T G C A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TAGGCAGGCTGGCTCC--
--NGTAGGTTGGCATNNN
 A C G T C T G A A T C G C T A G A T G C C G T A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A C G T A G T C A T G C A C G T A C G T
A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TAGGCAGGCTGGCTCC
----TWGTCTGV----
 A C G T C T G A A T C G C T A G A T G C C G T A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A C G T A G T C A T G C
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TAGGCAGGCTGGCTCC
------NGCTN-----
 A C G T C T G A A T C G C T A G A T G C C G T A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A C G T A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TAGGCAGGCTGGCTCC-
-----TGTCTGDCACCT
 A C G T C T G A A T C G C T A G A T G C C G T A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A C G T A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.51
Offset:11
Orientation:forward strand
Alignment:TAGGCAGGCTGGCTCC-
-----------GCTCCG
 A C G T C T G A A T C G C T A G A T G C C G T A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A C G T A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TAGGCAGGCTGGCTCC
-GGNGCGNCTGTTNNN
 A C G T C T G A A T C G C T A G A T G C C G T A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A C G T A G T C A T G C
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TAGGCAGGCTGGCTCC
CTGGCAGNCTGCCA--
 A C G T C T G A A T C G C T A G A T G C C G T A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A C G T A G T C A T G C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TAGGCAGGCTGGCTCC
------GGCGCGCT--
 A C G T C T G A A T C G C T A G A T G C C G T A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A C G T A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:TAGGCAGGCTGGCTCC
------TGCTGACTCA
 A C G T C T G A A T C G C T A G A T G C C G T A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A C G T A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A