Information for 8-AATATTTGMATGATKA (Motif 12)

C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G G T C A G T C A A C G T T A C G G T C A C G A T A C T G T C G A
Reverse Opposite:
A C G T G T A C C G T A A C G T A T G C G T C A A C G T A C G T A G T C C G T A T G C A C G T A A C G T G T C A A G C T G A C T
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.779
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 17.9bp
Average Position of motif in Background29.8 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AATATTTGMATGATKA
---ATTTGCATAA---
 C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G G T C A G T C A A C G T T A C G G T C A C G A T A C T G T C G A
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AATATTTGMATGATKA
TTCATTTGCATAT---
 C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G G T C A G T C A A C G T T A C G G T C A C G A T A C T G T C G A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AATATTTGMATGATKA
--AATTTGCATANT--
 C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G G T C A G T C A A C G T T A C G G T C A C G A T A C T G T C G A
A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AATATTTGMATGATKA
---ATTTGCATA----
 C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G G T C A G T C A A C G T T A C G G T C A C G A T A C T G T C G A
A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AATATTTGMATGATKA
---ATTTGCATAT---
 C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G G T C A G T C A A C G T T A C G G T C A C G A T A C T G T C G A
A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AATATTTGMATGATKA
----TTTGATTGATGN
 C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G G T C A G T C A A C G T T A C G G T C A C G A T A C T G T C G A
A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

POU3F3/MA0788.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AATATTTGMATGATKA
-AAATTAGCATAAT--
 C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G G T C A G T C A A C G T T A C G G T C A C G A T A C T G T C G A
A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AATATTTGMATGATKA
NNTNNCAATATTAG--------
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G G T C A G T C A A C G T T A C G G T C A C G A T A C T G T C G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AATATTTGMATGATKA
NNTNNCAATATTAG--------
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G G T C A G T C A A C G T T A C G G T C A C G A T A C T G T C G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AATATTTGMATGATKA
TNTAATTTGCATANNN-
 A C G T C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G G T C A G T C A A C G T T A C G G T C A C G A T A C T G T C G A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T