Information for 6-GCAGGGTGAC (Motif 6)

A T C G T A G C G C T A C T A G C A T G C A T G C G A T A C T G T C G A G A T C
Reverse Opposite:
C T A G A G C T T G A C G C T A G T A C G T A C G A T C C G A T A T C G T A G C
p-value:1e-14
log p-value:-3.331e+01
Information Content per bp:1.664
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.37%
Number of Background Sequences with motif547.1
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets52.7 +/- 29.5bp
Average Position of motif in Background50.6 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGGTGAC--
AGGNCANNGTGACCT
 A C G T A C G T A C G T A T C G T A G C G C T A C T A G C A T G C A T G C G A T A C T G T C G A G A T C A C G T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGGTGAC---
GGTCANNGTGACCTN
 A C G T A C G T A T C G T A G C G C T A C T A G C A T G C A T G C G A T A C T G T C G A G A T C A C G T A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCAGGGTGAC
TCAGNGAGCGTGAC
 A C G T A C G T A C G T A C G T A T C G T A G C G C T A C T A G C A T G C A T G C G A T A C T G T C G A G A T C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCAGGGTGAC---
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A T C G T A G C G C T A C T A G C A T G C A T G C G A T A C T G T C G A G A T C A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAGGGTGAC---
--AGGGTAACAGC
 A T C G T A G C G C T A C T A G C A T G C A T G C G A T A C T G T C G A G A T C A C G T A C G T A C G T
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCAGGGTGAC
TCAAGGTCAN
 A T C G T A G C G C T A C T A G C A T G C A T G C G A T A C T G T C G A G A T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

ESR1/MA0112.3/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCAGGGTGAC---
CAGGTCACCGTGACCTT
 A C G T A C G T A C G T A C G T A T C G T A G C G C T A C T A G C A T G C A T G C G A T A C T G T C G A G A T C A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCAGGGTGAC-
---NCGTGACN
 A T C G T A G C G C T A C T A G C A T G C A T G C G A T A C T G T C G A G A T C A C G T
A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Atf3/MA0605.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCAGGGTGAC--
----GATGACGT
 A T C G T A G C G C T A C T A G C A T G C A T G C G A T A C T G T C G A G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCAGGGTGAC----
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A T C G T A G C G C T A C T A G C A T G C A T G C G A T A C T G T C G A G A T C A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A