Information for 13-CTGGTATCAT (Motif 31)

A G T C A C G T A C T G A C T G A C G T C G T A C G A T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.419e+01
Information Content per bp:1.964
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.6 +/- 25.7bp
Average Position of motif in Background54.7 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CTGGTATCAT----
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CTGGTATCAT----
AATAGGGTATCATATAT
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CTGGTATCAT----
AATAGGGTATCAATATT
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTGGTATCAT----
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTGGTATCAT----
AATAGGGTATCAATTAT
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTGGTATCAT----
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTGGTATCAT----
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTGGTATCAT----
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGGTATCAT-
-TGGTTTCAGT
 A G T C A C G T A C T G A C T G A C G T C G T A C G A T A G T C C G T A A C G T A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTGGTATCAT
GGTCTGGCAT---
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A C G A T A G T C C G T A A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T