Information for 11-RTMAAKATDATCTTTA (Motif 23)

C T G A G A C T T G A C G C T A C T G A A C T G T G C A G A C T C T A G C G T A G C A T A G T C G A C T C G A T A C G T C G T A
Reverse Opposite:
G C A T T G C A C G T A C T G A T C A G C G T A C G A T G A T C C G T A A C G T T G A C G A C T C G A T A C T G C T G A G A C T
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.536
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif46.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets36.8 +/- 25.3bp
Average Position of motif in Background49.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:RTMAAKATDATCTTTA-
------ATGACCTTGAA
 C T G A G A C T T G A C G C T A C T G A A C T G T G C A G A C T C T A G C G T A G C A T A G T C G A C T C G A T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:RTMAAKATDATCTTTA
-TAATGATGATCACTA
 C T G A G A C T T G A C G C T A C T G A A C T G T G C A G A C T C T A G C G T A G C A T A G T C G A C T C G A T A C G T C G T A
A C G T C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:RTMAAKATDATCTTTA---
-------TGACCTTTNCNT
 C T G A G A C T T G A C G C T A C T G A A C T G T G C A G A C T C T A G C G T A G C A T A G T C G A C T C G A T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0172.1_Sox1_2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:RTMAAKATDATCTTTA---
----CTATAATTGTTAGCG
 C T G A G A C T T G A C G C T A C T G A A C T G T G C A G A C T C T A G C G T A G C A T A G T C G A C T C G A T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:RTMAAKATDATCTTTA
-----NATGACCTTGA
 C T G A G A C T T G A C G C T A C T G A A C T G T G C A G A C T C T A G C G T A G C A T A G T C G A C T C G A T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:RTMAAKATDATCTTTA
------ATGACCTTGA
 C T G A G A C T T G A C G C T A C T G A A C T G T G C A G A C T C T A G C G T A G C A T A G T C G A C T C G A T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:RTMAAKATDATCTTTA---
---NNNGTGACCTTTGNNN
 C T G A G A C T T G A C G C T A C T G A A C T G T G C A G A C T C T A G C G T A G C A T A G T C G A C T C G A T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:RTMAAKATDATCTTTA
-----NYTAATCCYB-
 C T G A G A C T T G A C G C T A C T G A A C T G T G C A G A C T C T A G C G T A G C A T A G T C G A C T C G A T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-RTMAAKATDATCTTTA
TTTAATTATAATTAAG-
 A C G T C T G A G A C T T G A C G C T A C T G A A C T G T G C A G A C T C T A G C G T A G C A T A G T C G A C T C G A T A C G T C G T A
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:RTMAAKATDATCTTTA---
--NNNNATGACCTTGANTN
 C T G A G A C T T G A C G C T A C T G A A C T G T G C A G A C T C T A G C G T A G C A T A G T C G A C T C G A T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A