Information for 2-RTGASTCAYN (Motif 2)

T C G A C G A T A C T G G T C A A T G C C G A T T G A C G C T A A G C T A G T C
Reverse Opposite:
T C A G T C G A C G A T A C T G C G T A T A C G C A G T T G A C G C T A A G C T
p-value:1e-24
log p-value:-5.726e+01
Information Content per bp:1.509
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.97%
Number of Background Sequences with motif222.6
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets47.6 +/- 23.9bp
Average Position of motif in Background51.2 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:1
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-RTGASTCAYN-
DATGASTCATNN
 A C G T T C G A C G A T A C T G G T C A A T G C C G A T T G A C G C T A A G C T A G T C A C G T
C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:2
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCAYN-
DATGASTCATHN
 A C G T T C G A C G A T A C T G G T C A A T G C C G A T T G A C G C T A A G C T A G T C A C G T
C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:RTGASTCAYN
ATGASTCATY
 T C G A C G A T A C T G G T C A A T G C C G A T T G A C G C T A A G C T A G T C
T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:RTGASTCAYN
ATGASTCATH
 T C G A C G A T A C T G G T C A A T G C C G A T T G A C G C T A A G C T A G T C
T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCAYN-
NATGACTCATNN
 A C G T T C G A C G A T A C T G G T C A A T G C C G A T T G A C G C T A A G C T A G T C A C G T
C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--RTGASTCAYN
NNVTGASTCATN
 A C G T A C G T T C G A C G A T A C T G G T C A A T G C C G A T T G A C G C T A A G C T A G T C
A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.94
Offset:0
Orientation:forward strand
Alignment:RTGASTCAYN
ATGACTCATC
 T C G A C G A T A C T G G T C A A T G C C G A T T G A C G C T A A G C T A G T C
T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--RTGASTCAYN
GGATGACTCAT-
 A C G T A C G T T C G A C G A T A C T G G T C A A T G C C G A T T G A C G C T A A G C T A G T C
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:9
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCAYN
GGTGACTCATC
 A C G T T C G A C G A T A C T G G T C A A T G C C G A T T G A C G C T A A G C T A G T C
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:10
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--RTGASTCAYN
GGATGACTCATC
 A C G T A C G T T C G A C G A T A C T G G T C A A T G C C G A T T G A C G C T A A G C T A G T C
C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C