Information for 14-ATGATAAWCTGAT (Motif 19)

G T C A C G A T A C T G C G T A C G A T C G T A C G T A C G T A A T G C C G A T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A T C G C G A T A C G T C G A T C G T A C G A T T A G C C G T A A C G T
p-value:1e-9
log p-value:-2.213e+01
Information Content per bp:1.831
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 25.7bp
Average Position of motif in Background52.2 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATGATAAWCTGAT
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T G T C A C G A T A C T G C G T A C G A T C G T A C G T A C G T A A T G C C G A T A C T G C G T A A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATGATAAWCTGAT--
---GTAATCDGATTA
 G T C A C G A T A C T G C G T A C G A T C G T A C G T A C G T A A T G C C G A T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ATGATAAWCTGAT---
----TAATYNRATTAR
 G T C A C G A T A C T G C G T A C G A T C G T A C G T A C G T A A T G C C G A T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATGATAAWCTGAT--
---GWAAYHTGABMC
 G T C A C G A T A C T G C G T A C G A T C G T A C G T A C G T A A T G C C G A T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0022.1_Gata5_1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATGATAAWCTGAT--------
----TAAACTGATAAGAAGAT
 G T C A C G A T A C T G C G T A C G A T C G T A C G T A C G T A A T G C C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATGATAAWCTGAT
TATAATTATAATATTC-
 A C G T A C G T A C G T A C G T G T C A C G A T A C T G C G T A C G A T C G T A C G T A C G T A A T G C C G A T A C T G C G T A A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATGATAAWCTGAT--
----TAATTTAATTA
 G T C A C G A T A C T G C G T A C G A T C G T A C G T A C G T A A T G C C G A T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATGATAAWCTGAT--
---NTAATBNAATTA
 G T C A C G A T A C T G C G T A C G A T C G T A C G T A C G T A A T G C C G A T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ATGATAAWCTGAT------
----NNATNTGATANNNNN
 G T C A C G A T A C T G C G T A C G A T C G T A C G T A C G T A A T G C C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATGATAAWCTGAT
---AACAGCTGAT
 G T C A C G A T A C T G C G T A C G A T C G T A C G T A C G T A A T G C C G A T A C T G C G T A A C G T
A C G T A C G T A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T