Information for 13-AGHTATTCTTTGT (Motif 18)

C G T A A C T G G A T C A C G T C T G A A C G T A C G T A T G C A C G T C G A T A C G T A C T G A C G T
Reverse Opposite:
C G T A G T A C C G T A C G T A C G T A A T C G T G C A C G T A G A C T T G C A C T A G A G T C C G A T
p-value:1e-9
log p-value:-2.241e+01
Information Content per bp:1.770
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.0 +/- 28.2bp
Average Position of motif in Background67.3 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AGHTATTCTTTGT------
---ANTCCTTTGTCTNNNN
 C G T A A C T G G A T C A C G T C T G A A C G T A C G T A T G C A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGHTATTCTTTGT------
--TNNTCCTTTGTTCTNNT
 C G T A A C T G G A T C A C G T C T G A A C G T A C G T A T G C A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGHTATTCTTTGT------
--NNNTCCTTTGTTCTNNN
 C G T A A C T G G A T C A C G T C T G A A C G T A C G T A T G C A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGHTATTCTTTGT
NNNTGTTGTTGTTNG-
 A C G T A C G T A C G T C G T A A C T G G A T C A C G T C T G A A C G T A C G T A T G C A C G T C G A T A C G T A C T G A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.63
Offset:7
Orientation:forward strand
Alignment:AGHTATTCTTTGT
-------CTTTGT
 C G T A A C T G G A T C A C G T C T G A A C G T A C G T A T G C A C G T C G A T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.62
Offset:6
Orientation:forward strand
Alignment:AGHTATTCTTTGT---
------YCTTTGTTCC
 C G T A A C T G G A T C A C G T C T G A A C G T A C G T A T G C A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.62
Offset:6
Orientation:forward strand
Alignment:AGHTATTCTTTGT---
------CCWTTGTYYB
 C G T A A C T G G A T C A C G T C T G A A C G T A C G T A T G C A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AGHTATTCTTTGT---
------CCTTTGTTTT
 C G T A A C T G G A T C A C G T C T G A A C G T A C G T A T G C A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Foxq1/MA0040.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGHTATTCTTTGT-
---TATTGTTTATT
 C G T A A C T G G A T C A C G T C T G A A C G T A C G T A T G C A C G T C G A T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGHTATTCTTTGT-
NTNTTGTTGTTTGTN
 A C G T C G T A A C T G G A T C A C G T C T G A A C G T A C G T A T G C A C G T C G A T A C G T A C T G A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T