Information for 7-AGGCAAATATTTG (Motif 4)

C T G A A C T G A C T G A G T C C G T A C G T A C G T A A G C T C T G A A C G T A G C T C G A T C T A G
Reverse Opposite:
A G T C C G T A C T G A C G T A A G C T C T G A A C G T A C G T A C G T A C T G A G T C G T A C A G C T
p-value:1e-14
log p-value:-3.253e+01
Information Content per bp:1.889
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.5 +/- 22.7bp
Average Position of motif in Background46.7 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAATATTTG
AAGGCAAGTGT---
 A C G T C T G A A C T G A C T G A G T C C G T A C G T A C G T A A G C T C T G A A C G T A G C T C G A T C T A G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGGCAAATATTTG
ATATGCAAAT-----
 A C G T A C G T C T G A A C T G A C T G A G T C C G T A C G T A C G T A A G C T C T G A A C G T A G C T C G A T C T A G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGGCAAATATTTG
WAAGTAAAYA----
 A C G T C T G A A C T G A C T G A G T C C G T A C G T A C G T A A G C T C T G A A C G T A G C T C G A T C T A G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAAATATTTG
TTATGCAAAT-----
 A C G T A C G T C T G A A C T G A C T G A G T C C G T A C G T A C G T A A G C T C T G A A C G T A G C T C G A T C T A G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAAATATTTG
ATATGCAAATNNN--
 A C G T A C G T C T G A A C T G A C T G A G T C C G T A C G T A C G T A A G C T C T G A A C G T A G C T C G A T C T A G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGGCAAATATTTG----
---CTAATATTGCTAAA
 C T G A A C T G A C T G A G T C C G T A C G T A C G T A A G C T C T G A A C G T A G C T C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGGCAAATATTTG----
---CTAATATTGCTAAA
 C T G A A C T G A C T G A G T C C G T A C G T A C G T A A G C T C T G A A C G T A G C T C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAATATTTG
TATGTAAATAT---
 A C G T C T G A A C T G A C T G A G T C C G T A C G T A C G T A A G C T C T G A A C G T A G C T C G A T C T A G
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAATATTTG
TATGCAAAT-----
 A C G T C T G A A C T G A C T G A G T C C G T A C G T A C G T A A G C T C T G A A C G T A G C T C G A T C T A G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAATATTTG
TATGTAAATAT---
 A C G T C T G A A C T G A C T G A G T C C G T A C G T A C G T A A G C T C T G A A C G T A G C T C G A T C T A G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T