p-value: | 1e-13 |
log p-value: | -3.100e+01 |
Information Content per bp: | 1.934 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.74% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 35.5 +/- 23.4bp |
Average Position of motif in Background | 48.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGCCTGACCAGA---- -NNNNTGACCCGGCGCG |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTGCCTGACCAGA AGGTGHCAGACA--- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTGCCTGACCAGA -----TGACCT-- |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGCCTGACCAGA---- -NNCNTGACCCCGCTCT |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTGCCTGACCAGA -----TGACCTYA |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTGCCTGACCAGA ATGCCAGACN--- |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTGCCTGACCAGA-- -----TGCCCAGNHW |
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Pax2/MA0067.1/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTGCCTGACCAGA --NCGTGACN--- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTGCCTGACCAGA AGGTGNCAGACAG-- |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTGCCTGACCAGA ---CCTCACCTG- |
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