Information for 3-ACCTTTGVCCTTTATT (Motif 6)

G T C A A G T C A T G C A G C T A C G T A G C T A C T G T A G C A G T C A G T C A C G T A C G T A C G T C G T A A C G T C A G T
Reverse Opposite:
G T C A G T C A C G A T T G C A G T C A C G T A A C T G C T A G A C T G A G T C C T G A C G T A C T G A A T C G C T A G A C G T
p-value:1e-16
log p-value:-3.764e+01
Information Content per bp:1.806
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 21.9bp
Average Position of motif in Background56.8 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----ACCTTTGVCCTTTATT
GTTGACCTTTGACCTTT---
 A C G T A C G T A C G T A C G T G T C A A G T C A T G C A G C T A C G T A G C T A C T G T A G C A G T C A G T C A C G T A C G T A C G T C G T A A C G T C A G T
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTTGVCCTTTATT
TGACCTTTGACCTN----
 A C G T A C G T G T C A A G T C A T G C A G C T A C G T A G C T A C T G T A G C A G T C A G T C A C G T A C G T A C G T C G T A A C G T C A G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTTGVCCTTTATT
TGACCTTTGACCTC----
 A C G T A C G T G T C A A G T C A T G C A G C T A C G T A G C T A C T G T A G C A G T C A G T C A C G T A C G T A C G T C G T A A C G T C A G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTTGVCCTTTATT
TGACCTTTGCCCTA----
 A C G T A C G T G T C A A G T C A T G C A G C T A C G T A G C T A C T G T A G C A G T C A G T C A C G T A C G T A C G T C G T A A C G T C A G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTTGVCCTTTATT
TGACCTTTGACCCC----
 A C G T A C G T G T C A A G T C A T G C A G C T A C G T A G C T A C T G T A G C A G T C A G T C A C G T A C G T A C G T C G T A A C G T C A G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTTGVCCTTTATT
TGACCTCTGACCCCN---
 A C G T A C G T G T C A A G T C A T G C A G C T A C G T A G C T A C T G T A G C A G T C A G T C A C G T A C G T A C G T C G T A A C G T C A G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTTGVCCTTTATT
TGACCTTTGACCCC----
 A C G T A C G T G T C A A G T C A T G C A G C T A C G T A G C T A C T G T A G C A G T C A G T C A C G T A C G T A C G T C G T A A C G T C A G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACCTTTGVCCTTTATT
-CNNTTGACCTTTG--
 G T C A A G T C A T G C A G C T A C G T A G C T A C T G T A G C A G T C A G T C A C G T A C G T A C G T C G T A A C G T C A G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTTGVCCTTTATT
TGACCTTTGACCCC----
 A C G T A C G T G T C A A G T C A T G C A G C T A C G T A G C T A C T G T A G C A G T C A G T C A C G T A C G T A C G T C G T A A C G T C A G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTTGVCCTTTATT
TGACCTTTGCCCTAN---
 A C G T A C G T G T C A A G T C A T G C A G C T A C G T A G C T A C T G T A G C A G T C A G T C A C G T A C G T A C G T C G T A A C G T C A G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T A C G T A C G T