Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-51 | -1.189e+02 | 0.0000 | 86.0 | 11.13% | 590.1 | 1.25% | motif file (matrix) |
svg |
2 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-47 | -1.103e+02 | 0.0000 | 85.0 | 11.00% | 641.8 | 1.35% | motif file (matrix) |
svg |
3 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-47 | -1.088e+02 | 0.0000 | 109.0 | 14.10% | 1168.0 | 2.47% | motif file (matrix) |
svg |
4 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-45 | -1.051e+02 | 0.0000 | 98.0 | 12.68% | 959.7 | 2.03% | motif file (matrix) |
svg |
5 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-45 | -1.046e+02 | 0.0000 | 168.0 | 21.73% | 2929.1 | 6.18% | motif file (matrix) |
svg |
6 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-44 | -1.015e+02 | 0.0000 | 71.0 | 9.18% | 461.9 | 0.98% | motif file (matrix) |
svg |
7 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-44 | -1.015e+02 | 0.0000 | 114.0 | 14.75% | 1391.1 | 2.94% | motif file (matrix) |
svg |
8 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-41 | -9.582e+01 | 0.0000 | 142.0 | 18.37% | 2290.7 | 4.83% | motif file (matrix) |
svg |
9 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-41 | -9.524e+01 | 0.0000 | 102.0 | 13.20% | 1177.5 | 2.49% | motif file (matrix) |
svg |
10 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-40 | -9.350e+01 | 0.0000 | 110.0 | 14.23% | 1408.7 | 2.97% | motif file (matrix) |
svg |
11 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-39 | -9.210e+01 | 0.0000 | 117.0 | 15.14% | 1622.2 | 3.42% | motif file (matrix) |
svg |
12 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-39 | -9.123e+01 | 0.0000 | 142.0 | 18.37% | 2388.1 | 5.04% | motif file (matrix) |
svg |
13 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-34 | -7.939e+01 | 0.0000 | 187.0 | 24.19% | 4314.1 | 9.11% | motif file (matrix) |
svg |
14 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-28 | -6.460e+01 | 0.0000 | 111.0 | 14.36% | 2003.4 | 4.23% | motif file (matrix) |
svg |
15 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-25 | -5.951e+01 | 0.0000 | 114.0 | 14.75% | 2235.9 | 4.72% | motif file (matrix) |
svg |
16 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-25 | -5.812e+01 | 0.0000 | 311.0 | 40.23% | 11004.6 | 23.23% | motif file (matrix) |
svg |
17 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-20 | -4.688e+01 | 0.0000 | 58.0 | 7.50% | 778.0 | 1.64% | motif file (matrix) |
svg |
18 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-19 | -4.382e+01 | 0.0000 | 41.0 | 5.30% | 405.1 | 0.86% | motif file (matrix) |
svg |
19 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-17 | -4.111e+01 | 0.0000 | 96.0 | 12.42% | 2148.2 | 4.53% | motif file (matrix) |
svg |
20 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-17 | -3.976e+01 | 0.0000 | 90.0 | 11.64% | 1973.9 | 4.17% | motif file (matrix) |
svg |
21 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-16 | -3.894e+01 | 0.0000 | 169.0 | 21.86% | 5284.5 | 11.15% | motif file (matrix) |
svg |
22 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-15 | -3.623e+01 | 0.0000 | 98.0 | 12.68% | 2398.0 | 5.06% | motif file (matrix) |
svg |
23 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-15 | -3.533e+01 | 0.0000 | 104.0 | 13.45% | 2670.7 | 5.64% | motif file (matrix) |
svg |
24 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-15 | -3.482e+01 | 0.0000 | 85.0 | 11.00% | 1955.2 | 4.13% | motif file (matrix) |
svg |
25 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-14 | -3.267e+01 | 0.0000 | 72.0 | 9.31% | 1552.1 | 3.28% | motif file (matrix) |
svg |
26 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-13 | -3.188e+01 | 0.0000 | 55.0 | 7.12% | 996.0 | 2.10% | motif file (matrix) |
svg |
27 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-13 | -3.148e+01 | 0.0000 | 125.0 | 16.17% | 3730.3 | 7.87% | motif file (matrix) |
svg |
28 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-13 | -3.036e+01 | 0.0000 | 78.0 | 10.09% | 1852.3 | 3.91% | motif file (matrix) |
svg |
29 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-12 | -2.818e+01 | 0.0000 | 18.0 | 2.33% | 107.3 | 0.23% | motif file (matrix) |
svg |
30 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-11 | -2.762e+01 | 0.0000 | 68.0 | 8.80% | 1576.2 | 3.33% | motif file (matrix) |
svg |
31 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-11 | -2.742e+01 | 0.0000 | 62.0 | 8.02% | 1363.8 | 2.88% | motif file (matrix) |
svg |
32 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-11 | -2.662e+01 | 0.0000 | 82.0 | 10.61% | 2158.4 | 4.56% | motif file (matrix) |
svg |
33 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.524e+01 | 0.0000 | 16.0 | 2.07% | 95.7 | 0.20% | motif file (matrix) |
svg |
34 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-10 | -2.445e+01 | 0.0000 | 64.0 | 8.28% | 1542.4 | 3.26% | motif file (matrix) |
svg |
35 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-9 | -2.236e+01 | 0.0000 | 131.0 | 16.95% | 4564.9 | 9.64% | motif file (matrix) |
svg |
36 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-9 | -2.210e+01 | 0.0000 | 83.0 | 10.74% | 2413.3 | 5.09% | motif file (matrix) |
svg |
37 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-9 | -2.184e+01 | 0.0000 | 10.0 | 1.29% | 33.3 | 0.07% | motif file (matrix) |
svg |
38 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-9 | -2.103e+01 | 0.0000 | 27.0 | 3.49% | 389.7 | 0.82% | motif file (matrix) |
svg |
39 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-8 | -2.067e+01 | 0.0000 | 12.0 | 1.55% | 64.0 | 0.14% | motif file (matrix) |
svg |
40 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-8 | -1.987e+01 | 0.0000 | 19.0 | 2.46% | 203.8 | 0.43% | motif file (matrix) |
svg |
41 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-8 | -1.929e+01 | 0.0000 | 24.0 | 3.10% | 338.0 | 0.71% | motif file (matrix) |
svg |
42 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-8 | -1.879e+01 | 0.0000 | 26.0 | 3.36% | 404.8 | 0.85% | motif file (matrix) |
svg |
43 |
| GFY(?)/Promoter/Homer | 1e-7 | -1.679e+01 | 0.0000 | 12.0 | 1.55% | 90.2 | 0.19% | motif file (matrix) |
svg |
44 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-6 | -1.566e+01 | 0.0000 | 20.0 | 2.59% | 294.7 | 0.62% | motif file (matrix) |
svg |
45 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-6 | -1.552e+01 | 0.0000 | 234.0 | 30.27% | 10573.8 | 22.32% | motif file (matrix) |
svg |
46 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-6 | -1.511e+01 | 0.0000 | 11.0 | 1.42% | 86.4 | 0.18% | motif file (matrix) |
svg |
47 |
| Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-6 | -1.394e+01 | 0.0000 | 41.0 | 5.30% | 1076.7 | 2.27% | motif file (matrix) |
svg |
48 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-5 | -1.348e+01 | 0.0000 | 32.0 | 4.14% | 749.1 | 1.58% | motif file (matrix) |
svg |
49 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-5 | -1.341e+01 | 0.0000 | 55.0 | 7.12% | 1685.2 | 3.56% | motif file (matrix) |
svg |
50 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-5 | -1.307e+01 | 0.0000 | 19.0 | 2.46% | 318.4 | 0.67% | motif file (matrix) |
svg |
51 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-5 | -1.278e+01 | 0.0000 | 82.0 | 10.61% | 2960.6 | 6.25% | motif file (matrix) |
svg |
52 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.255e+01 | 0.0000 | 58.0 | 7.50% | 1868.1 | 3.94% | motif file (matrix) |
svg |
53 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-4 | -1.142e+01 | 0.0001 | 43.0 | 5.56% | 1281.2 | 2.70% | motif file (matrix) |
svg |
54 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-4 | -1.047e+01 | 0.0002 | 69.0 | 8.93% | 2527.5 | 5.33% | motif file (matrix) |
svg |
55 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-4 | -1.037e+01 | 0.0002 | 15.0 | 1.94% | 257.7 | 0.54% | motif file (matrix) |
svg |
56 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.030e+01 | 0.0002 | 43.0 | 5.56% | 1345.4 | 2.84% | motif file (matrix) |
svg |
57 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-4 | -9.677e+00 | 0.0004 | 29.0 | 3.75% | 788.1 | 1.66% | motif file (matrix) |
svg |
58 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.822e+00 | 0.0009 | 205.0 | 26.52% | 9954.2 | 21.01% | motif file (matrix) |
svg |
59 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-3 | -8.690e+00 | 0.0010 | 56.0 | 7.24% | 2054.4 | 4.34% | motif file (matrix) |
svg |
60 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-3 | -8.471e+00 | 0.0013 | 34.0 | 4.40% | 1061.7 | 2.24% | motif file (matrix) |
svg |
61 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-3 | -8.394e+00 | 0.0013 | 64.0 | 8.28% | 2467.1 | 5.21% | motif file (matrix) |
svg |
62 |
| Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer | 1e-3 | -8.256e+00 | 0.0015 | 12.0 | 1.55% | 213.2 | 0.45% | motif file (matrix) |
svg |
63 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-3 | -7.706e+00 | 0.0026 | 53.0 | 6.86% | 1994.4 | 4.21% | motif file (matrix) |
svg |
64 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-3 | -7.635e+00 | 0.0027 | 25.0 | 3.23% | 723.0 | 1.53% | motif file (matrix) |
svg |
65 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-3 | -7.272e+00 | 0.0039 | 35.0 | 4.53% | 1182.8 | 2.50% | motif file (matrix) |
svg |
66 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -7.242e+00 | 0.0039 | 29.0 | 3.75% | 916.6 | 1.93% | motif file (matrix) |
svg |
67 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-3 | -7.237e+00 | 0.0039 | 61.0 | 7.89% | 2431.8 | 5.13% | motif file (matrix) |
svg |
68 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.086e+00 | 0.0045 | 9.0 | 1.16% | 148.0 | 0.31% | motif file (matrix) |
svg |
69 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -6.736e+00 | 0.0063 | 39.0 | 5.05% | 1407.4 | 2.97% | motif file (matrix) |
svg |
70 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -6.581e+00 | 0.0072 | 7.0 | 0.91% | 99.5 | 0.21% | motif file (matrix) |
svg |
71 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-2 | -6.561e+00 | 0.0073 | 42.0 | 5.43% | 1564.5 | 3.30% | motif file (matrix) |
svg |
72 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -6.551e+00 | 0.0073 | 41.0 | 5.30% | 1517.9 | 3.20% | motif file (matrix) |
svg |
73 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -6.456e+00 | 0.0078 | 42.0 | 5.43% | 1573.6 | 3.32% | motif file (matrix) |
svg |
74 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.354e+00 | 0.0086 | 35.0 | 4.53% | 1249.0 | 2.64% | motif file (matrix) |
svg |
75 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.059e+00 | 0.0113 | 67.0 | 8.67% | 2867.9 | 6.05% | motif file (matrix) |
svg |
76 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.021e+00 | 0.0116 | 54.0 | 6.99% | 2207.2 | 4.66% | motif file (matrix) |
svg |
77 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.968e+00 | 0.0121 | 22.0 | 2.85% | 686.1 | 1.45% | motif file (matrix) |
svg |
78 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.694e+00 | 0.0157 | 71.0 | 9.18% | 3122.3 | 6.59% | motif file (matrix) |
svg |
79 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.308e+00 | 0.0228 | 100.0 | 12.94% | 4736.7 | 10.00% | motif file (matrix) |
svg |
80 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.238e+00 | 0.0242 | 22.0 | 2.85% | 731.0 | 1.54% | motif file (matrix) |
svg |
81 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -5.219e+00 | 0.0243 | 85.0 | 11.00% | 3937.0 | 8.31% | motif file (matrix) |
svg |
82 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -4.948e+00 | 0.0315 | 59.0 | 7.63% | 2592.1 | 5.47% | motif file (matrix) |
svg |
83 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -4.858e+00 | 0.0341 | 56.0 | 7.24% | 2447.1 | 5.17% | motif file (matrix) |
svg |
84 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.847e+00 | 0.0341 | 6.0 | 0.78% | 104.2 | 0.22% | motif file (matrix) |
svg |
85 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -4.839e+00 | 0.0341 | 89.0 | 11.51% | 4215.7 | 8.90% | motif file (matrix) |
svg |
86 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-2 | -4.835e+00 | 0.0341 | 59.0 | 7.63% | 2607.3 | 5.50% | motif file (matrix) |
svg |
87 |
| EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-2 | -4.776e+00 | 0.0353 | 13.0 | 1.68% | 367.4 | 0.78% | motif file (matrix) |
svg |
88 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.682e+00 | 0.0383 | 7.0 | 0.91% | 142.0 | 0.30% | motif file (matrix) |
svg |
89 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -4.679e+00 | 0.0383 | 23.0 | 2.98% | 816.7 | 1.72% | motif file (matrix) |
svg |
90 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.660e+00 | 0.0383 | 40.0 | 5.17% | 1648.3 | 3.48% | motif file (matrix) |
svg |