Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-63 | -1.464e+02 | 0.0000 | 101.0 | 12.66% | 622.4 | 1.32% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-45 | -1.040e+02 | 0.0000 | 160.0 | 20.05% | 2581.4 | 5.47% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-43 | -1.003e+02 | 0.0000 | 137.0 | 17.17% | 1973.9 | 4.18% | motif file (matrix) |
svg |
4 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-39 | -9.120e+01 | 0.0000 | 137.0 | 17.17% | 2147.3 | 4.55% | motif file (matrix) |
svg |
5 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-34 | -7.939e+01 | 0.0000 | 352.0 | 44.11% | 11366.9 | 24.10% | motif file (matrix) |
svg |
6 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-32 | -7.385e+01 | 0.0000 | 113.0 | 14.16% | 1786.2 | 3.79% | motif file (matrix) |
svg |
7 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-30 | -6.909e+01 | 0.0000 | 189.0 | 23.68% | 4581.7 | 9.71% | motif file (matrix) |
svg |
8 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-28 | -6.674e+01 | 0.0000 | 122.0 | 15.29% | 2229.8 | 4.73% | motif file (matrix) |
svg |
9 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-24 | -5.646e+01 | 0.0000 | 57.0 | 7.14% | 590.8 | 1.25% | motif file (matrix) |
svg |
10 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-23 | -5.429e+01 | 0.0000 | 81.0 | 10.15% | 1246.9 | 2.64% | motif file (matrix) |
svg |
11 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-23 | -5.408e+01 | 0.0000 | 60.0 | 7.52% | 691.8 | 1.47% | motif file (matrix) |
svg |
12 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-23 | -5.400e+01 | 0.0000 | 51.0 | 6.39% | 488.4 | 1.04% | motif file (matrix) |
svg |
13 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-23 | -5.382e+01 | 0.0000 | 109.0 | 13.66% | 2139.6 | 4.54% | motif file (matrix) |
svg |
14 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-22 | -5.143e+01 | 0.0000 | 95.0 | 11.90% | 1740.2 | 3.69% | motif file (matrix) |
svg |
15 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-21 | -5.042e+01 | 0.0000 | 78.0 | 9.77% | 1238.3 | 2.62% | motif file (matrix) |
svg |
16 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-20 | -4.802e+01 | 0.0000 | 85.0 | 10.65% | 1506.6 | 3.19% | motif file (matrix) |
svg |
17 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-20 | -4.773e+01 | 0.0000 | 70.0 | 8.77% | 1061.4 | 2.25% | motif file (matrix) |
svg |
18 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-19 | -4.446e+01 | 0.0000 | 82.0 | 10.28% | 1499.9 | 3.18% | motif file (matrix) |
svg |
19 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-18 | -4.357e+01 | 0.0000 | 89.0 | 11.15% | 1753.4 | 3.72% | motif file (matrix) |
svg |
20 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.525e+01 | 0.0000 | 173.0 | 21.68% | 5473.7 | 11.60% | motif file (matrix) |
svg |
21 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-14 | -3.319e+01 | 0.0000 | 76.0 | 9.52% | 1618.7 | 3.43% | motif file (matrix) |
svg |
22 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-14 | -3.259e+01 | 0.0000 | 78.0 | 9.77% | 1708.5 | 3.62% | motif file (matrix) |
svg |
23 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-13 | -3.188e+01 | 0.0000 | 80.0 | 10.03% | 1805.0 | 3.83% | motif file (matrix) |
svg |
24 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-13 | -3.145e+01 | 0.0000 | 94.0 | 11.78% | 2343.1 | 4.97% | motif file (matrix) |
svg |
25 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-13 | -3.055e+01 | 0.0000 | 23.0 | 2.88% | 168.8 | 0.36% | motif file (matrix) |
svg |
26 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-13 | -3.019e+01 | 0.0000 | 46.0 | 5.76% | 728.3 | 1.54% | motif file (matrix) |
svg |
27 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-13 | -3.014e+01 | 0.0000 | 77.0 | 9.65% | 1756.1 | 3.72% | motif file (matrix) |
svg |
28 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-13 | -3.005e+01 | 0.0000 | 50.0 | 6.27% | 850.8 | 1.80% | motif file (matrix) |
svg |
29 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-12 | -2.781e+01 | 0.0000 | 121.0 | 15.16% | 3617.9 | 7.67% | motif file (matrix) |
svg |
30 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-11 | -2.580e+01 | 0.0000 | 63.0 | 7.89% | 1402.1 | 2.97% | motif file (matrix) |
svg |
31 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-11 | -2.580e+01 | 0.0000 | 61.0 | 7.64% | 1331.7 | 2.82% | motif file (matrix) |
svg |
32 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-10 | -2.517e+01 | 0.0000 | 88.0 | 11.03% | 2381.0 | 5.05% | motif file (matrix) |
svg |
33 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-10 | -2.497e+01 | 0.0000 | 82.0 | 10.28% | 2150.3 | 4.56% | motif file (matrix) |
svg |
34 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-10 | -2.486e+01 | 0.0000 | 29.0 | 3.63% | 363.6 | 0.77% | motif file (matrix) |
svg |
35 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-10 | -2.466e+01 | 0.0000 | 65.0 | 8.15% | 1515.5 | 3.21% | motif file (matrix) |
svg |
36 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-10 | -2.306e+01 | 0.0000 | 30.0 | 3.76% | 419.2 | 0.89% | motif file (matrix) |
svg |
37 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.938e+01 | 0.0000 | 39.0 | 4.89% | 776.5 | 1.65% | motif file (matrix) |
svg |
38 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-7 | -1.836e+01 | 0.0000 | 45.0 | 5.64% | 1017.0 | 2.16% | motif file (matrix) |
svg |
39 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.835e+01 | 0.0000 | 16.0 | 2.01% | 149.0 | 0.32% | motif file (matrix) |
svg |
40 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-7 | -1.647e+01 | 0.0000 | 61.0 | 7.64% | 1710.9 | 3.63% | motif file (matrix) |
svg |
41 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.489e+01 | 0.0000 | 49.0 | 6.14% | 1306.5 | 2.77% | motif file (matrix) |
svg |
42 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-6 | -1.482e+01 | 0.0000 | 122.0 | 15.29% | 4564.5 | 9.68% | motif file (matrix) |
svg |
43 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-6 | -1.436e+01 | 0.0000 | 58.0 | 7.27% | 1697.7 | 3.60% | motif file (matrix) |
svg |
44 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-5 | -1.362e+01 | 0.0000 | 23.0 | 2.88% | 415.9 | 0.88% | motif file (matrix) |
svg |
45 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.150e+01 | 0.0001 | 10.0 | 1.25% | 99.5 | 0.21% | motif file (matrix) |
svg |
46 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-4 | -1.087e+01 | 0.0002 | 42.0 | 5.26% | 1223.3 | 2.59% | motif file (matrix) |
svg |
47 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-4 | -1.086e+01 | 0.0002 | 18.0 | 2.26% | 328.1 | 0.70% | motif file (matrix) |
svg |
48 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-4 | -1.025e+01 | 0.0003 | 18.0 | 2.26% | 344.2 | 0.73% | motif file (matrix) |
svg |
49 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-4 | -9.655e+00 | 0.0005 | 33.0 | 4.14% | 919.4 | 1.95% | motif file (matrix) |
svg |
50 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-4 | -9.552e+00 | 0.0005 | 231.0 | 28.95% | 10883.3 | 23.07% | motif file (matrix) |
svg |
51 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-4 | -9.548e+00 | 0.0005 | 37.0 | 4.64% | 1088.4 | 2.31% | motif file (matrix) |
svg |
52 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -9.098e+00 | 0.0008 | 41.0 | 5.14% | 1283.5 | 2.72% | motif file (matrix) |
svg |
53 |
| EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-3 | -8.821e+00 | 0.0010 | 18.0 | 2.26% | 386.6 | 0.82% | motif file (matrix) |
svg |
54 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -8.798e+00 | 0.0010 | 38.0 | 4.76% | 1173.3 | 2.49% | motif file (matrix) |
svg |
55 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-3 | -8.765e+00 | 0.0010 | 5.0 | 0.63% | 29.0 | 0.06% | motif file (matrix) |
svg |
56 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-3 | -8.682e+00 | 0.0011 | 69.0 | 8.65% | 2589.4 | 5.49% | motif file (matrix) |
svg |
57 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-3 | -8.452e+00 | 0.0014 | 61.0 | 7.64% | 2232.5 | 4.73% | motif file (matrix) |
svg |
58 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.362e+00 | 0.0015 | 60.0 | 7.52% | 2194.0 | 4.65% | motif file (matrix) |
svg |
59 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.053e+00 | 0.0020 | 35.0 | 4.39% | 1090.7 | 2.31% | motif file (matrix) |
svg |
60 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.780e+00 | 0.0025 | 8.0 | 1.00% | 102.5 | 0.22% | motif file (matrix) |
svg |
61 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-3 | -7.316e+00 | 0.0040 | 210.0 | 26.32% | 10134.3 | 21.48% | motif file (matrix) |
svg |
62 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-3 | -7.295e+00 | 0.0040 | 122.0 | 15.29% | 5411.8 | 11.47% | motif file (matrix) |
svg |
63 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-3 | -7.270e+00 | 0.0040 | 13.0 | 1.63% | 263.0 | 0.56% | motif file (matrix) |
svg |
64 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-3 | -7.196e+00 | 0.0043 | 6.0 | 0.75% | 62.4 | 0.13% | motif file (matrix) |
svg |
65 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-3 | -6.964e+00 | 0.0053 | 41.0 | 5.14% | 1430.8 | 3.03% | motif file (matrix) |
svg |
66 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -6.933e+00 | 0.0054 | 45.0 | 5.64% | 1616.2 | 3.43% | motif file (matrix) |
svg |
67 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-2 | -6.865e+00 | 0.0057 | 58.0 | 7.27% | 2236.7 | 4.74% | motif file (matrix) |
svg |
68 |
| GFY(?)/Promoter/Homer | 1e-2 | -6.853e+00 | 0.0057 | 7.0 | 0.88% | 91.0 | 0.19% | motif file (matrix) |
svg |
69 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.521e+00 | 0.0078 | 9.0 | 1.13% | 154.2 | 0.33% | motif file (matrix) |
svg |
70 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -6.194e+00 | 0.0106 | 48.0 | 6.02% | 1822.9 | 3.86% | motif file (matrix) |
svg |
71 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-2 | -6.160e+00 | 0.0108 | 35.0 | 4.39% | 1219.1 | 2.58% | motif file (matrix) |
svg |
72 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.818e+00 | 0.0150 | 21.0 | 2.63% | 628.1 | 1.33% | motif file (matrix) |
svg |
73 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -5.789e+00 | 0.0153 | 20.0 | 2.51% | 588.8 | 1.25% | motif file (matrix) |
svg |
74 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.629e+00 | 0.0177 | 24.0 | 3.01% | 768.0 | 1.63% | motif file (matrix) |
svg |
75 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.536e+00 | 0.0191 | 38.0 | 4.76% | 1409.2 | 2.99% | motif file (matrix) |
svg |
76 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -5.432e+00 | 0.0209 | 47.0 | 5.89% | 1849.6 | 3.92% | motif file (matrix) |
svg |
77 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -4.745e+00 | 0.0411 | 61.0 | 7.64% | 2628.0 | 5.57% | motif file (matrix) |
svg |
78 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -4.644e+00 | 0.0449 | 52.0 | 6.52% | 2185.2 | 4.63% | motif file (matrix) |
svg |
79 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -4.620e+00 | 0.0454 | 15.0 | 1.88% | 443.5 | 0.94% | motif file (matrix) |
svg |
80 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-2 | -4.615e+00 | 0.0454 | 14.0 | 1.75% | 402.3 | 0.85% | motif file (matrix) |
svg |