Information for 2-MAGGTCARRCCASRGR (Motif 6)

G T A C C G T A C T A G A C T G A C G T A G T C C G T A C T G A C T A G A G T C A G T C C G T A A T G C C T G A A C T G T C G A
Reverse Opposite:
A G C T A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T A C G T A C T G C G T A A G T C A G T C A C G T A C T G
p-value:1e-13
log p-value:-3.109e+01
Information Content per bp:1.854
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.5 +/- 22.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:MAGGTCARRCCASRGR
-CNGTCACGCCAC---
 G T A C C G T A C T A G A C T G A C G T A G T C C G T A C T G A C T A G A G T C A G T C C G T A A T G C C T G A A C T G T C G A
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-MAGGTCARRCCASRGR
TRAGGTCA---------
 A C G T G T A C C G T A C T A G A C T G A C G T A G T C C G T A C T G A C T A G A G T C A G T C C G T A A T G C C T G A A C T G T C G A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:MAGGTCARRCCASRGR
-AGGTCA---------
 G T A C C G T A C T A G A C T G A C G T A G T C C G T A C T G A C T A G A G T C A G T C C G T A A T G C C T G A A C T G T C G A
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---MAGGTCARRCCASRGR
ATCAAGGTCA---------
 A C G T A C G T A C G T G T A C C G T A C T A G A C T G A C G T A G T C C G T A C T G A C T A G A G T C A G T C C G T A A T G C C T G A A C T G T C G A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:MAGGTCARRCCASRGR
AAGGTCAC--------
 G T A C C G T A C T A G A C T G A C G T A G T C C G T A C T G A C T A G A G T C A G T C C G T A A T G C C T G A A C T G T C G A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--MAGGTCARRCCASRGR
TCAAGGTCAN--------
 A C G T A C G T G T A C C G T A C T A G A C T G A C G T A G T C C G T A C T G A C T A G A G T C A G T C C G T A A T G C C T G A A C T G T C G A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--MAGGTCARRCCASRGR
TCAAGGTCAT--------
 A C G T A C G T G T A C C G T A C T A G A C T G A C G T A G T C C G T A C T G A C T A G A G T C A G T C C G T A A T G C C T G A A C T G T C G A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----MAGGTCARRCCASRGR
TCTCAAAGGTCACGAG-----
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C T A G A C T G A C G T A G T C C G T A C T G A C T A G A G T C A G T C C G T A A T G C C T G A A C T G T C G A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-MAGGTCARRCCASRGR
AGRGGTCA---------
 A C G T G T A C C G T A C T A G A C T G A C G T A G T C C G T A C T G A C T A G A G T C A G T C C G T A A T G C C T G A A C T G T C G A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:MAGGTCARRCCASRGR
---ATCACCCCAT---
 G T A C C G T A C T A G A C T G A C G T A G T C C G T A C T G A C T A G A G T C A G T C C G T A A T G C C T G A A C T G T C G A
A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T