Information for 3-CCYNRGGSAA (Motif 3)

A T G C A G T C A G C T T A C G C T G A C T A G A C T G A T C G T G C A C G T A
Reverse Opposite:
G C A T A C G T T A G C A G T C A G T C G A C T A T G C C T G A C T A G T A C G
p-value:1e-28
log p-value:-6.575e+01
Information Content per bp:1.639
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif13.41%
Number of Background Sequences with motif1778.7
Percentage of Background Sequences with motif3.77%
Average Position of motif in Targets51.5 +/- 28.1bp
Average Position of motif in Background51.4 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-CCYNRGGSAA-
SCCTSAGGSCAW
 A C G T A T G C A G T C A G C T T A C G C T G A C T A G A C T G A T C G T G C A C G T A A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:2
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----CCYNRGGSAA-
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T T A C G C T G A C T A G A C T G A T C G T G C A C G T A A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CCYNRGGSAA-
GCCTCAGGGCAT
 A C G T A T G C A G T C A G C T T A C G C T G A C T A G A C T G A T C G T G C A C G T A A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----CCYNRGGSAA-
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T T A C G C T G A C T A G A C T G A T C G T G C A C G T A A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----CCYNRGGSAA-
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T T A C G C T G A C T A G A C T G A T C G T G C A C G T A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CCYNRGGSAA
AGCCTCAGGCA-
 A C G T A C G T A T G C A G T C A G C T T A C G C T G A C T A G A C T G A T C G T G C A C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CCYNRGGSAA
CGCCTCAGGCA-
 A C G T A C G T A T G C A G T C A G C T T A C G C T G A C T A G A C T G A T C G T G C A C G T A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CCYNRGGSAA
AGCCTCAGGCA-
 A C G T A C G T A T G C A G T C A G C T T A C G C T G A C T A G A C T G A T C G T G C A C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CCYNRGGSAA
TGCCCNGGGGCA
 A C G T A C G T A T G C A G T C A G C T T A C G C T G A C T A G A C T G A T C G T G C A C G T A
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CCYNRGGSAA-
TTGCCCTAGGGCAT
 A C G T A C G T A C G T A T G C A G T C A G C T T A C G C T G A C T A G A C T G A T C G T G C A C G T A A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T