Information for 2-TRTTTGYHTA (Motif 2)

A C G T T C A G A C G T A C G T A C G T C T A G A G C T G T C A A G C T C G T A
Reverse Opposite:
G C A T T C G A C A G T C T G A A G T C C G T A C G T A C G T A A G T C C G T A
p-value:1e-46
log p-value:-1.076e+02
Information Content per bp:1.708
Number of Target Sequences with motif176.0
Percentage of Target Sequences with motif22.06%
Number of Background Sequences with motif3005.5
Percentage of Background Sequences with motif6.37%
Average Position of motif in Targets51.8 +/- 25.5bp
Average Position of motif in Background50.2 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TRTTTGYHTA
TRTTTACTTW
 A C G T T C A G A C G T A C G T A C G T C T A G A G C T G T C A A G C T C G T A
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:TRTTTGYHTA
TGTTTATTT-
 A C G T T C A G A C G T A C G T A C G T C T A G A G C T G T C A A G C T C G T A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TRTTTGYHTA
TGTTTAC---
 A C G T T C A G A C G T A C G T A C G T C T A G A G C T G T C A A G C T C G T A
G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TRTTTGYHTA
TGTTTACTTT
 A C G T T C A G A C G T A C G T A C G T C T A G A G C T G T C A A G C T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TRTTTGYHTA
TGTTTACTTT
 A C G T T C A G A C G T A C G T A C G T C T A G A G C T G T C A A G C T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXP3/MA0850.1/Jaspar

Match Rank:6
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:TRTTTGYHTA
TGTTTAC---
 A C G T T C A G A C G T A C G T A C G T C T A G A G C T G T C A A G C T C G T A
A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:TRTTTGYHTA
TGTTTAC---
 A C G T T C A G A C G T A C G T A C G T C T A G A G C T G T C A A G C T C G T A
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TRTTTGYHTA
TTTGTTTACTTA
 A C G T A C G T A C G T T C A G A C G T A C G T A C G T C T A G A G C T G T C A A G C T C G T A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TRTTTGYHTA
ATATTTACATA
 A C G T A C G T T C A G A C G T A C G T A C G T C T A G A G C T G T C A A G C T C G T A
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TRTTTGYHTA-
NTGTTTAYATWW
 A C G T A C G T T C A G A C G T A C G T A C G T C T A G A G C T G T C A A G C T C G T A A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A