Information for 5-ACCYVTCYTTGAGTCT (Motif 15)

C G T A G T A C A T G C G A C T T C G A A G C T A T G C G A C T A C G T A C G T A T C G C G T A A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G T C G A G T A C C G A T A T G C T G C A G T C A C T G A A T C G C T G A A C G T C T G A A T C G C A T G A C G T
p-value:1e-11
log p-value:-2.583e+01
Information Content per bp:1.704
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.1 +/- 22.8bp
Average Position of motif in Background43.4 +/- 38.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARA::RXRA/MA0159.1/Jaspar

Match Rank:1
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--ACCYVTCYTTGAGTCT
TGACCTCTCNNTGACCT-
 A C G T A C G T C G T A G T A C A T G C G A C T T C G A A G C T A T G C G A C T A C G T A C G T A T C G C G T A A C T G A C G T A G T C A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:ACCYVTCYTTGAGTCT
-GCTGACCTTGAACTN
 C G T A G T A C A T G C G A C T T C G A A G C T A T G C G A C T A C G T A C G T A T C G C G T A A C T G A C G T A G T C A C G T
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.46
Offset:10
Orientation:forward strand
Alignment:ACCYVTCYTTGAGTCT--
----------TWGTCTGV
 C G T A G T A C A T G C G A C T T C G A A G C T A T G C G A C T A C G T A C G T A T C G C G T A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:ACCYVTCYTTGAGTCT-
---TNCCTTTGATCTTN
 C G T A G T A C A T G C G A C T T C G A A G C T A T G C G A C T A C G T A C G T A T C G C G T A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.46
Offset:-4
Orientation:forward strand
Alignment:----ACCYVTCYTTGAGTCT
AAAGACCTGTCAATCC----
 A C G T A C G T A C G T A C G T C G T A G T A C A T G C G A C T T C G A A G C T A T G C G A C T A C G T A C G T A T C G C G T A A C T G A C G T A G T C A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.46
Offset:-2
Orientation:reverse strand
Alignment:--ACCYVTCYTTGAGTCT
NCACCTGTN---------
 A C G T A C G T C G T A G T A C A T G C G A C T T C G A A G C T A T G C G A C T A C G T A C G T A T C G C G T A A C T G A C G T A G T C A C G T
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.45
Offset:5
Orientation:reverse strand
Alignment:ACCYVTCYTTGAGTCT-
-----CCTTTGATCTTT
 C G T A G T A C A T G C G A C T T C G A A G C T A T G C G A C T A C G T A C G T A T C G C G T A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.45
Offset:3
Orientation:reverse strand
Alignment:ACCYVTCYTTGAGTCT
---TGACCTTGAN---
 C G T A G T A C A T G C G A C T T C G A A G C T A T G C G A C T A C G T A C G T A T C G C G T A A C T G A C G T A G T C A C G T
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.45
Offset:0
Orientation:reverse strand
Alignment:ACCYVTCYTTGAGTCT
NNCATTCATTCATNNN
 C G T A G T A C A T G C G A C T T C G A A G C T A T G C G A C T A C G T A C G T A T C G C G T A A C T G A C G T A G T C A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.45
Offset:-4
Orientation:forward strand
Alignment:----ACCYVTCYTTGAGTCT
AAAGACCTGTCAATAC----
 A C G T A C G T A C G T A C G T C G T A G T A C A T G C G A C T T C G A A G C T A T G C G A C T A C G T A C G T A T C G C G T A A C T G A C G T A G T C A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T A C G T A C G T A C G T