Information for 15-CGCTCACCTT (Motif 16)

A G T C A C T G A G T C A C G T A G T C C G T A A G T C A G T C A G C T A C G T
Reverse Opposite:
C G T A C T G A A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C T G
p-value:1e-6
log p-value:-1.504e+01
Information Content per bp:1.958
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.0 +/- 26.8bp
Average Position of motif in Background56.9 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CGCTCACCTT
NNACTTACCTN
 A C G T A G T C A C T G A G T C A C G T A G T C C G T A A G T C A G T C A G C T A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGCTCACCTT
-CCTCACCTG
 A G T C A C T G A G T C A C G T A G T C C G T A A G T C A G T C A G C T A C G T
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGCTCACCTT--
--NTGACCTTGA
 A G T C A C T G A G T C A C G T A G T C C G T A A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGCTCACCTT-----
---TGACCTTTNCNT
 A G T C A C T G A G T C A C G T A G T C C G T A A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGCTCACCTT--
--ATGACCTTGA
 A G T C A C T G A G T C A C G T A G T C C G T A A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCACCTT---
ANCGCGCGCCCTTNN
 A C G T A C G T A G T C A C T G A G T C A C G T A G T C C G T A A G T C A G T C A G C T A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGCTCACCTT--
--CTGACCTTTG
 A G T C A C T G A G T C A C G T A G T C C G T A A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCACCTT---
NTCGCGCGCCTTNNN
 A C G T A C G T A G T C A C T G A G T C A C G T A G T C C G T A A G T C A G T C A G C T A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCTCACCTT-----
NNNGTGACCTTTGNNN
 A C G T A G T C A C T G A G T C A C G T A G T C C G T A A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCTCACCTT
NGCTN-----
 A G T C A C T G A G T C A C G T A G T C C G T A A G T C A G T C A G C T A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T