Information for 5-GRSCRCAGAGTGWCCK (Motif 10)

A C T G C T A G A T G C A G T C C T A G A T G C G T C A A T C G C G T A A C T G A C G T A C T G C G T A G T A C A G T C A C G T
Reverse Opposite:
G T C A A C T G A C T G C G A T A G T C C G T A A G T C A C G T A T G C A C G T A T C G G A C T A C T G A T C G A G T C A G T C
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.860
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.5 +/- 23.1bp
Average Position of motif in Background66.5 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GRSCRCAGAGTGWCCK
-AGGNCANNGTGACCT
 A C T G C T A G A T G C A G T C C T A G A T G C G T C A A T C G C G T A A C T G A C G T A C T G C G T A G T A C A G T C A C G T
A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GRSCRCAGAGTGWCCK-
-AGNACAGNCTGTTCTN
 A C T G C T A G A T G C A G T C C T A G A T G C G T C A A T C G C G T A A C T G A C G T A C T G C G T A G T A C A G T C A C G T A C G T
A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GRSCRCAGAGTGWCCK
NAGNACANNNTGTNCT
 A C T G C T A G A T G C A G T C C T A G A T G C G T C A A T C G C G T A A C T G A C G T A C T G C G T A G T A C A G T C A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:GRSCRCAGAGTGWCCK-
---------GTGACCTT
 A C T G C T A G A T G C A G T C C T A G A T G C G T C A A T C G C G T A A C T G A C G T A C T G C G T A G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GRSCRCAGAGTGWCCK-
--GRACAGWMTGTYCTB
 A C T G C T A G A T G C A G T C C T A G A T G C G T C A A T C G C G T A A C T G A C G T A C T G C G T A G T A C A G T C A C G T A C G T
A C G T A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GRSCRCAGAGTGWCCK-
--GGTCANNGTGACCTN
 A C T G C T A G A T G C A G T C C T A G A T G C G T C A A T C G C G T A A C T G A C G T A C T G C G T A G T A C A G T C A C G T A C G T
A C G T A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GRSCRCAGAGTGWCCK
TGACCTTTGCATGACCT
 A C G T A C T G C T A G A T G C A G T C C T A G A T G C G T C A A T C G C G T A A C T G A C G T A C T G C G T A G T A C A G T C A C G T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GRSCRCAGAGTGWCCK
TGACCTTTANTTGACCT
 A C G T A C T G C T A G A T G C A G T C C T A G A T G C G T C A A T C G C G T A A C T G A C G T A C T G C G T A G T A C A G T C A C G T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GRSCRCAGAGTGWCCK
BTGACCTCTNNHTGACCY
 A C G T A C G T A C T G C T A G A T G C A G T C C T A G A T G C G T C A A T C G C G T A A C T G A C G T A C T G C G T A G T A C A G T C A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GRSCRCAGAGTGWCCK-
--GVACAGNMTGTYCTB
 A C T G C T A G A T G C A G T C C T A G A T G C G T C A A T C G C G T A A C T G A C G T A C T G C G T A G T A C A G T C A C G T A C G T
A C G T A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G