p-value: | 1e-10 |
log p-value: | -2.471e+01 |
Information Content per bp: | 1.940 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.77% |
Number of Background Sequences with motif | 3.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 31.7 +/- 18.5bp |
Average Position of motif in Background | 83.0 +/- 9.2bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer
Match Rank: | 1 |
Score: | 0.73 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGTCACTGGGGG- GTAGGTCACTGGGTCA |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGTCACTGGGGG AAGGTCAC------ |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGTCACTGGGGG CAAAGGTCAAGGG--- |
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VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGTCACTGGGGG----- NGAGGTCANNGAGTTCANNN |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 5 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGTCACTGGGGG TRAGGTCA------- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGTCACTGGGGG AGGTCA------- |
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Nr1h3::Rxra/MA0494.1/Jaspar
Match Rank: | 7 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGGTCACTGGGGG--- NNGAGGTTACTNNAGGTCA |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 8 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGGTCACTGGGGG TCAAGGTCAN------ |
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RORA/MA0071.1/Jaspar
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGGTCACTGGGGG ATCAAGGTCA------- |
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LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGTCACTGGGGG--- GGGTTACTANAGGTCA |
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