p-value: | 1e-12 |
log p-value: | -2.837e+01 |
Information Content per bp: | 1.773 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.52% |
Number of Background Sequences with motif | 31.7 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 57.3 +/- 20.2bp |
Average Position of motif in Background | 51.8 +/- 33.1bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.09 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGACATTTAGCCA TGACCTTTNCNT- |
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NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGACATTTAGCCA- CTTGGCANNNTGCCAA |
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PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGACATTTAGCCA- TGACCTTTGCCCCA |
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RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACATTTAGCCA- TGACCTTTGCCCTA |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACATTTAGCCA NNNNTGACCTTTNNNN- |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACATTTAGCCA NNNGTGACCTTTGNNN- |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGACATTTAGCCA- TGGCACCATGCCAA |
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Nr2f6/MA0677.1/Jaspar
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACATTTAGCCA- TGACCTTTGACCTN |
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Pparg::Rxra/MA0065.2/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACATTTAGCCA-- TGACCTTTGCCCTAN |
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Rxra/MA0512.2/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACATTTAGCCA- TGACCTTTGACCCC |
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