Information for 5-CWAGCATTGAAGCAWA (Motif 5)

G T A C G C A T C G T A A C T G G T A C C G T A A C G T A C G T C A T G C G T A C G T A A T C G A G T C C G T A G C A T G T C A
Reverse Opposite:
A C G T C G T A C G A T A C T G A T G C C G A T C G A T G T A C C G T A C G T A A C G T A C T G A G T C C G A T C G T A A C T G
p-value:1e-10
log p-value:-2.506e+01
Information Content per bp:1.756
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.7 +/- 15.6bp
Average Position of motif in Background28.3 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0067.1_Sox18_1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CWAGCATTGAAGCAWA-
-TTCAATTGTTCTAAAA
 G T A C G C A T C G T A A C T G G T A C C G T A A C G T A C G T C A T G C G T A C G T A A T C G A G T C C G T A G C A T G T C A A C G T
A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0070.1_Sox30_1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CWAGCATTGAAGCAWA
ANNTCCATTGTTCNNN-
 A C G T G T A C G C A T C G T A A C T G G T A C C G T A A C G T A C G T C A T G C G T A C G T A A T C G A G T C C G T A G C A T G T C A
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CWAGCATTGAAGCAWA
GGAAAAATTGTTAGGAA
 A C G T G T A C G C A T C G T A A C T G G T A C C G T A A C G T A C G T C A T G C G T A C G T A A T C G A G T C C G T A G C A T G T C A
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0197.1_Zfp105_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CWAGCATTGAAGCAWA
NAAANTTATTGAANCAN-
 A C G T A C G T G T A C G C A T C G T A A C T G G T A C C G T A A C G T A C G T C A T G C G T A C G T A A T C G A G T C C G T A G C A T G T C A
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CWAGCATTGAAGCAWA
---CCWTTGTYYB---
 G T A C G C A T C G T A A C T G G T A C C G T A A C G T A C G T C A T G C G T A C G T A A T C G A G T C C G T A G C A T G T C A
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CWAGCATTGAAGCAWA
---CCATTGTTNY---
 G T A C G C A T C G T A A C T G G T A C C G T A A C G T A C G T C A T G C G T A C G T A A T C G A G T C C G T A G C A T G T C A
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CWAGCATTGAAGCAWA
-----ATTGTT-----
 G T A C G C A T C G T A A C T G G T A C C G T A A C G T A C G T C A T G C G T A C G T A A T C G A G T C C G T A G C A T G T C A
A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CWAGCATTGAAGCAWA
---CCATTGTTC----
 G T A C G C A T C G T A A C T G G T A C C G T A A C G T A C G T C A T G C G T A C G T A A T C G A G T C C G T A G C A T G T C A
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CWAGCATTGAAGCAWA
---CCATTGTTYB---
 G T A C G C A T C G T A A C T G G T A C C G T A A C G T A C G T C A T G C G T A C G T A A T C G A G T C C G T A G C A T G T C A
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CWAGCATTGAAGCAWA-
AATCAATTGTTCCGCTA
 G T A C G C A T C G T A A C T G G T A C C G T A A C G T A C G T C A T G C G T A C G T A A T C G A G T C C G T A G C A T G T C A A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A