Information for 11-GTTTACATGSHTTCCT (Motif 18)

A C T G C G A T A G C T A C G T C G T A A G T C C G T A A C G T C A T G A T C G G C A T A C G T A C G T A T G C G T A C C G A T
Reverse Opposite:
C G T A A C T G A T C G G T C A C G T A C G A T T A G C G A T C C G T A C G A T A C T G C G A T G T C A C T G A C G T A T G A C
p-value:1e-8
log p-value:-1.866e+01
Information Content per bp:1.714
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif37.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets57.1 +/- 22.3bp
Average Position of motif in Background56.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACATGSHTTCCT
TGTTTACTTT-------
 A C G T A C T G C G A T A G C T A C G T C G T A A G T C C G T A A C G T C A T G A T C G G C A T A C G T A C G T A T G C G T A C C G A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACATGSHTTCCT
TGTTTACTTT-------
 A C G T A C T G C G A T A G C T A C G T C G T A A G T C C G T A A C G T C A T G A T C G G C A T A C G T A C G T A T G C G T A C C G A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTTTACATGSHTTCCT
TNTGTTTACTT--------
 A C G T A C G T A C G T A C T G C G A T A G C T A C G T C G T A A G T C C G T A A C G T C A T G A T C G G C A T A C G T A C G T A T G C G T A C C G A T
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTTTACATGSHTTCCT
SCHTGTTTACAT--------
 A C G T A C G T A C G T A C G T A C T G C G A T A G C T A C G T C G T A A G T C C G T A A C G T C A T G A T C G G C A T A C G T A C G T A T G C G T A C C G A T
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GTTTACATGSHTTCCT
TCCATGTTTACTTTG------
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A G C T A C G T C G T A A G T C C G T A A C G T C A T G A T C G G C A T A C G T A C G T A T G C G T A C C G A T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTTTACATGSHTTCCT
TGTTTACTTAGG-----
 A C G T A C T G C G A T A G C T A C G T C G T A A G T C C G T A A C G T C A T G A T C G G C A T A C G T A C G T A T G C G T A C C G A T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T A C G T A C G T A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACATGSHTTCCT
TGTTTACH---------
 A C G T A C T G C G A T A G C T A C G T C G T A A G T C C G T A A C G T C A T G A T C G G C A T A C G T A C G T A T G C G T A C C G A T
A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTTTACATGSHTTCCT
BTVATTWGCATA-------
 A C G T A C G T A C G T A C T G C G A T A G C T A C G T C G T A A G T C C G T A A C G T C A T G A T C G G C A T A C G T A C G T A T G C G T A C C G A T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GTTTACATGSHTTCCT
NNNTTTGTTTACTTTTN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A G C T A C G T C G T A A G T C C G T A A C G T C A T G A T C G G C A T A C G T A C G T A T G C G T A C C G A T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T A C G T A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTTTACATGSHTTCCT
CNTGTTTACATA-------
 A C G T A C G T A C G T A C T G C G A T A G C T A C G T C G T A A G T C C G T A A C G T C A T G A T C G G C A T A C G T A C G T A T G C G T A C C G A T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T