Information for 9-YGTCCTTTCTAAT (Motif 17)

G A T C A T C G A G C T G A T C G T A C G A C T C G A T A G C T T A G C C G A T C T G A G T C A A C G T
Reverse Opposite:
T G C A A C G T A G C T C G T A A C T G C T G A C G T A C T G A C A T G C T A G T C G A T A G C C T A G
p-value:1e-8
log p-value:-1.955e+01
Information Content per bp:1.645
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif5.09%
Number of Background Sequences with motif643.1
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets44.8 +/- 22.8bp
Average Position of motif in Background49.0 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--YGTCCTTTCTAAT
NNGCACCTTTCTCC-
 A C G T A C G T G A T C A T C G A G C T G A T C G T A C G A C T C G A T A G C T T A G C C G A T C T G A G T C A A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:YGTCCTTTCTAAT----
--NNNTTTNTAATACNG
 G A T C A T C G A G C T G A T C G T A C G A C T C G A T A G C T T A G C C G A T C T G A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:YGTCCTTTCTAAT--
-NNTTTTTCTTATNT
 G A T C A T C G A G C T G A T C G T A C G A C T C G A T A G C T T A G C C G A T C T G A G T C A A C G T A C G T A C G T
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YGTCCTTTCTAAT---
NNNTCCTTTGTTCTNNN
 A C G T G A T C A T C G A G C T G A T C G T A C G A C T C G A T A G C T T A G C C G A T C T G A G T C A A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YGTCCTTTCTAAT---
TNNTCCTTTGTTCTNNT
 A C G T G A T C A T C G A G C T G A T C G T A C G A C T C G A T A G C T T A G C C G A T C T G A G T C A A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YGTCCTTTCTAAT
ACTTTCGTTTCT---
 A C G T A C G T G A T C A T C G A G C T G A T C G T A C G A C T C G A T A G C T T A G C C G A T C T G A G T C A A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:YGTCCTTTCTAAT
---CCWTTGTY--
 G A T C A T C G A G C T G A T C G T A C G A C T C G A T A G C T T A G C C G A T C T G A G T C A A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:YGTCCTTTCTAAT
---CCTTTGTTTT
 G A T C A T C G A G C T G A T C G T A C G A C T C G A T A G C T T A G C C G A T C T G A G T C A A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YGTCCTTTCTAAT
---CCTTTGATGT
 G A T C A T C G A G C T G A T C G T A C G A C T C G A T A G C T T A G C C G A T C T G A G T C A A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:YGTCCTTTCTAAT
---CCTTTGTT--
 G A T C A T C G A G C T G A T C G T A C G A C T C G A T A G C T T A G C C G A T C T G A G T C A A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T