Information for 23-CCCTNTGTGATTTGAT (Motif 35)

G T A C G A T C G T A C G A C T T C A G C A G T A C T G C G A T A C T G T G C A G A C T G A C T C G A T T C A G C G T A A C G T
Reverse Opposite:
G T C A G C A T A G T C C G T A C T G A C T G A A C G T T A G C G C T A T G A C G T C A A G T C C G T A C A T G C T A G C A T G
p-value:1e-8
log p-value:-1.913e+01
Information Content per bp:1.582
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif33.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.6 +/- 24.7bp
Average Position of motif in Background52.4 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCCTNTGTGATTTGAT
----CNGTGATTTN--
 G T A C G A T C G T A C G A C T T C A G C A G T A C T G C G A T A C T G T G C A G A C T G A C T C G A T T C A G C G T A A C G T
A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCTNTGTGATTTGAT
NCNTTTGTTATTTNN-
 G T A C G A T C G T A C G A C T T C A G C A G T A C T G C G A T A C T G T G C A G A C T G A C T C G A T T C A G C G T A A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCTNTGTGATTTGAT
-CCTTTGTT-------
 G T A C G A T C G T A C G A C T T C A G C A G T A C T G C G A T A C T G T G C A G A C T G A C T C G A T T C A G C G T A A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCCTNTGTGATTTGAT
-CCTTTGATCTTT---
 G T A C G A T C G T A C G A C T T C A G C A G T A C T G C G A T A C T G T G C A G A C T G A C T C G A T T C A G C G T A A C G T
A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCTNTGTGATTTGAT
AACCCTTTGATCTTT---
 A C G T A C G T G T A C G A T C G T A C G A C T T C A G C A G T A C T G C G A T A C T G T G C A G A C T G A C T C G A T T C A G C G T A A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCCTNTGTGATTTGAT
ACCATATGTT-------
 A C G T G T A C G A T C G T A C G A C T T C A G C A G T A C T G C G A T A C T G T G C A G A C T G A C T C G A T T C A G C G T A A C G T
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCCTNTGTGATTTGAT
---NNTGTGGTTT---
 G T A C G A T C G T A C G A C T T C A G C A G T A C T G C G A T A C T G T G C A G A C T G A C T C G A T T C A G C G T A A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCCTNTGTGATTTGAT
-CCTTTGTTTT-----
 G T A C G A T C G T A C G A C T T C A G C A G T A C T G C G A T A C T G T G C A G A C T G A C T C G A T T C A G C G T A A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCCTNTGTGATTTGAT--
------GWAAYHTGABMC
 G T A C G A T C G T A C G A C T T C A G C A G T A C T G C G A T A C T G T G C A G A C T G A C T C G A T T C A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCCTNTGTGATTTGAT-----
----ATTTCCTTTGATCTATA
 G T A C G A T C G T A C G A C T T C A G C A G T A C T G C G A T A C T G T G C A G A C T G A C T C G A T T C A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A