p-value: | 1e-11 |
log p-value: | -2.726e+01 |
Information Content per bp: | 1.673 |
Number of Target Sequences with motif | 38.0 |
Percentage of Target Sequences with motif | 5.13% |
Number of Background Sequences with motif | 598.0 |
Percentage of Background Sequences with motif | 1.28% |
Average Position of motif in Targets | 43.8 +/- 26.5bp |
Average Position of motif in Background | 49.8 +/- 31.6bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox5/MA0087.1/Jaspar
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGATTGTTAT --ATTGTTA- |
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MF0011.1_HMG_class/Jaspar
Match Rank: | 2 |
Score: | 0.75 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGATTGTTAT --ATTGTT-- |
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SRY/MA0084.1/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGATTGTTAT- --ATTGTTTAN |
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PB0165.1_Sox11_2/Jaspar
Match Rank: | 4 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGATTGTTAT--- AAAATTGTTATGAA |
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PB0175.1_Sox4_2/Jaspar
Match Rank: | 5 |
Score: | 0.72 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGATTGTTAT--- GGAAAAATTGTTAGGAA |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 6 |
Score: | 0.71 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGATTGTTAT--- AANTTATTGTTCTNNA |
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PB0062.1_Sox12_1/Jaspar
Match Rank: | 7 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGATTGTTAT---- TAATTGTTCTAAAC |
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PB0067.1_Sox18_1/Jaspar
Match Rank: | 8 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGATTGTTAT---- TTCAATTGTTCTAAAA |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 9 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGATTGTTAT--- NNTTTATTGTTCTNNN |
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PB0074.1_Sox8_1/Jaspar
Match Rank: | 10 |
Score: | 0.67 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGATTGTTAT--- GTATCTATTGTTCTTTA |
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