Information for 8-GGCACAGGCAGGAAGG (Motif 19)

A C T G A C T G A T G C C G T A A G T C C G T A A T C G T C A G A G T C C G T A A C T G C T A G T C G A T C G A C T A G A T C G
Reverse Opposite:
A T G C A G T C A G C T A C G T A G T C A G T C C G A T C T A G A G T C A T G C C G A T A C T G C G A T A T C G A G T C G T A C
p-value:1e-13
log p-value:-3.214e+01
Information Content per bp:1.783
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.1 +/- 21.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGCACAGGCAGGAAGG
CCAGGAACAG---------
 A C G T A C G T A C G T A C T G A C T G A T G C C G T A A G T C C G T A A T C G T C A G A G T C C G T A A C T G C T A G T C G A T C G A C T A G A T C G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCACAGGCAGGAAGG
AGCGGCACACACGCAA---
 A C G T A C G T A C G T A C T G A C T G A T G C C G T A A G T C C G T A A T C G T C A G A G T C C G T A A C T G C T A G T C G A T C G A C T A G A T C G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GGCACAGGCAGGAAGG
NNNNTTGGGCACNNCN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C C G T A A G T C C G T A A T C G T C A G A G T C C G T A A C T G C T A G T C G A T C G A C T A G A T C G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGCACAGGCAGGAAGG
NGTGGGCAT-----------
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C C G T A A G T C C G T A A T C G T C A G A G T C C G T A A C T G C T A G T C G A T C G A C T A G A T C G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GGCACAGGCAGGAAGG
AAGGKGRCGCAGGCA------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C C G T A A G T C C G T A A T C G T C A G A G T C C G T A A C T G C T A G T C G A T C G A C T A G A T C G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGCACAGGCAGGAAGG
--CACAGN--------
 A C T G A C T G A T G C C G T A A G T C C G T A A T C G T C A G A G T C C G T A A C T G C T A G T C G A T C G A C T A G A T C G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCACAGGCAGGAAGG
GGCCACACCCAN-----
 A C G T A C T G A C T G A T G C C G T A A G T C C G T A A T C G T C A G A G T C C G T A A C T G C T A G T C G A T C G A C T A G A T C G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGCACAGGCAGGAAGG
GCCACACCCA------
 A C T G A C T G A T G C C G T A A G T C C G T A A T C G T C A G A G T C C G T A A C T G C T A G T C G A T C G A C T A G A T C G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGCACAGGCAGGAAGG
GGTTGGCAT-----------
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C C G T A A G T C C G T A A T C G T C A G A G T C C G T A A C T G C T A G T C G A T C G A C T A G A T C G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCACAGGCAGGAAGG
TGGCACGTGCCA-----
 A C G T A C T G A C T G A T G C C G T A A G T C C G T A A T C G T C A G A G T C C G T A A C T G C T A G T C G A T C G A C T A G A T C G
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T