Information for 4-TAMTGACAAA (Motif 4)

A C G T C T G A G T C A A C G T T C A G C T G A G A T C G T C A C G T A T G C A
Reverse Opposite:
A C G T G C A T A C G T C T A G A G C T A G T C G T C A C A G T A G C T C G T A
p-value:1e-10
log p-value:-2.369e+01
Information Content per bp:1.669
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif490.1
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets49.6 +/- 27.6bp
Average Position of motif in Background48.9 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TAMTGACAAA
--TTGACAG-
 A C G T C T G A G T C A A C G T T C A G C T G A G A T C G T C A C G T A T G C A
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TAMTGACAAA
-RHTGWCAR-
 A C G T C T G A G T C A A C G T T C A G C T G A G A T C G T C A C G T A T G C A
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAMTGACAAA
GGTGYTGACAGS
 A C G T A C G T A C G T C T G A G T C A A C G T T C A G C T G A G A T C G T C A C G T A T G C A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

PH0073.1_Hoxc9/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TAMTGACAAA-
NNAATTAATGACCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T C A A C G T T C A G C T G A G A T C G T C A C G T A T G C A A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TAMTGACAAA
--TTGACAGG
 A C G T C T G A G T C A A C G T T C A G C T G A G A T C G T C A C G T A T G C A
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAMTGACAAA
GKTAATGR----
 A C G T A C G T A C G T C T G A G T C A A C G T T C A G C T G A G A T C G T C A C G T A T G C A
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TAMTGACAAA
ARNTGACA--
 A C G T C T G A G T C A A C G T T C A G C T G A G A T C G T C A C G T A T G C A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TAMTGACAAA--
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T C A A C G T T C A G C T G A G A T C G T C A C G T A T G C A A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAMTGACAAA
ATATTTACATA
 A C G T A C G T C T G A G T C A A C G T T C A G C T G A G A T C G T C A C G T A T G C A
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAMTGACAAA-----
GATATTGACAGCTGCGT
 A C G T A C G T A C G T C T G A G T C A A C G T T C A G C T G A G A T C G T C A C G T A T G C A A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T