Information for 5-CCCTAGGATAACC (Motif 2)

A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T G A C G A T C G T A C T G A G T A C G T A C
Reverse Opposite:
A C T G A C T G A G C T A C G T C G T A A G C T A G T C A G T C A C G T C G T A A C T G A C T G A C T G
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 27.8bp
Average Position of motif in Background28.5 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCCTAGGATAACC--
CTACTAGGATGTNNTN
 A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T G A C G A T C G T A C T G A G T A C G T A C A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCTAGGATAACC
TTGCCCTAGGGCAT--
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T G A C G A T C G T A C T G A G T A C G T A C
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCCTAGGATAACC-----
-CCTTAGTTAACTAAAAT
 A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T G A C G A T C G T A C T G A G T A C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCCTAGGATAACC-
TGACCTNTAGTAACCC
 A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T G A C G A T C G T A C T G A G T A C G T A C A C G T
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCCTAGGATAACC
GCCTCAGGGCAT--
 A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T G A C G A T C G T A C T G A G T A C G T A C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCCTAGGATAACC
TGWCCTCARNTGACC
 A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T G A C G A T C G T A C T G A G T A C G T A C
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCCTAGGATAACC
SCCTSAGGSCAW--
 A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T G A C G A T C G T A C T G A G T A C G T A C
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCCTAGGATAACC-----
-ACTTAGTTAACTAAAAA
 A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T G A C G A T C G T A C T G A G T A C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCCTAGGATAACC
-----AGATAASR
 A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T G A C G A T C G T A C T G A G T A C G T A C
A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCCTAGGATAACC
----TGGAAAA--
 A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T G A C G A T C G T A C T G A G T A C G T A C
A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T