Information for 5-GGGGGCAGCA (Motif 2)

A T C G A C T G C A T G C T A G A C T G G A T C C G T A C T A G A T G C G C T A
Reverse Opposite:
C G A T A T C G A G T C C G A T C T A G A G T C A G T C G T A C T G A C T A G C
p-value:1e-23
log p-value:-5.508e+01
Information Content per bp:1.851
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif8.67%
Number of Background Sequences with motif643.9
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets49.8 +/- 23.4bp
Average Position of motif in Background48.7 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGCAGCA
TNNGGGCAG--
 A C G T A T C G A C T G C A T G C T A G A C T G G A T C C G T A C T A G A T G C G C T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGCAGCA
NGTGGGCAT--
 A C G T A T C G A C T G C A T G C T A G A C T G G A T C C G T A C T A G A T G C G C T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCAGCA
ANTGCGGGGGCGGN-
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G A C T G G A T C C G T A C T A G A T G C G C T A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGGGCAGCA
TGAGTCAGCA
 A T C G A C T G C A T G C T A G A C T G G A T C C G T A C T A G A T G C G C T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGGGGCAGCA----
---GTCAGCANNTN
 A T C G A C T G C A T G C T A G A C T G G A T C C G T A C T A G A T G C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGGGCAGCA---
ADGGYAGYAGCATCT
 A C G T A C G T A T C G A C T G C A T G C T A G A C T G G A T C C G T A C T A G A T G C G C T A A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCAGCA--
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G A C T G G A T C C G T A C T A G A T G C G C T A A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGGGGCAGCA
TGTCAGGGGGCG---
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G A C T G G A T C C G T A C T A G A T G C G C T A
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGGGGCAGCA---
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G A C T G G A T C C G T A C T A G A T G C G C T A A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGGGGCAGCA---
---GGGAGGACNG
 A T C G A C T G C A T G C T A G A C T G G A T C C G T A C T A G A T G C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G