p-value: | 1e-11 |
log p-value: | -2.554e+01 |
Information Content per bp: | 1.897 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.83% |
Number of Background Sequences with motif | 5.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 46.1 +/- 22.0bp |
Average Position of motif in Background | 41.2 +/- 18.3bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCAGGCAGGCTCT -AAGGCAAGTGT- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGGCAGGCTCT CCAGACAG----- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGGCAGGCTCT CCAGACRSVB--- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 4 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGGCAGGCTCT BCAGACWA----- |
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Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer
Match Rank: | 5 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCAGGCAGGCTCT TBGCACGCAA----- |
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THAP1/MA0597.1/Jaspar
Match Rank: | 6 |
Score: | 0.50 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCAGGCAGGCTCT TNNGGGCAG----- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 7 |
Score: | 0.49 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGGCAGGCTCT-- SCAGYCADGCATGAC |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 8 |
Score: | 0.49 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCAGGCAGGCTCT ---CACAGN---- |
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ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer
Match Rank: | 9 |
Score: | 0.49 |
Offset: | -8 |
Orientation: | forward strand |
Alignment: | --------GCAGGCAGGCTCT AAGGKGRCGCAGGCA------ |
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POL006.1_BREu/Jaspar
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCAGGCAGGCTCT ---GGCGCGCT-- |
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