Information for 4-ACAATACTCAGGG (Motif 2)

C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G
Reverse Opposite:
A T G C A G T C A G T C A C G T A C T G C G T A A C T G C G A T C G T A G A C T A C G T A C T G C G A T
p-value:1e-13
log p-value:-3.048e+01
Information Content per bp:1.811
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.1 +/- 26.5bp
Average Position of motif in Background34.8 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACAATACTCAGGG---
----GCCTCAGGGCAT
 C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACAATACTCAGGG
-AGCCACTCAAG-
 C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACAATACTCAGGG
-AAGCACTTAA--
 C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACAATACTCAGGG--
---GTCCCCAGGGGA
 C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G A C G T A C G T
A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

SOX8/MA0868.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACAATACTCAGGG--
AACAATGTGCAGTGTT
 A C G T C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G A C G T A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACAATACTCAGGG
TCCAATCCACA---
 A C G T C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ACAATACTCAGGG---
----SCCTSAGGSCAW
 C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACAATACTCAGGG
TGACANARRCCAGRC
 A C G T A C G T C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ACAATACTCAGGG
-MRSCACTYAA--
 C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ACAATACTCAGGG-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T