Information for 5-TTTTAAAAAC (Motif 10)

C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C
Reverse Opposite:
T A C G A C G T A G C T G C A T A G C T C G A T C G T A G T C A G C T A C G T A
p-value:1e-5
log p-value:-1.185e+01
Information Content per bp:1.599
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.60%
Number of Background Sequences with motif1663.0
Percentage of Background Sequences with motif3.50%
Average Position of motif in Targets54.2 +/- 28.9bp
Average Position of motif in Background49.9 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TTTTAAAAAC--
CCGTATTATAAACAA
 A C G T A C G T A C G T C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTTTAAAAAC-
-TTTGAAACCG
 C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAAAAAC
NATTCAAAT--
 A C G T C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTTAAAAAC
ATATTAATTAA
 A C G T C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PB0080.1_Tbp_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTTTAAAAAC--
TCTTTATATATAAATA
 A C G T A C G T A C G T A C G T C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTTTAAAAAC
-ATTAAA---
 C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTTAAAAAC----
GTATAAAAGGCGGGG
 A C G T C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTTAAAAAC----
GTATAAAAGGCGGGG
 A C G T C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTTTAAAAAC-
-TTTAATTGCN
 C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C A C G T
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

PB0129.1_Glis2_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTTAAAAAC--
AATATTAATAAAGA
 A C G T A C G T C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A