Information for 7-GTCASTGAAA (Motif 8)

C A T G G A C T A T G C G C T A T A C G C A G T A T C G T G C A G T C A G T C A
Reverse Opposite:
C A G T C A G T A C G T T A G C G T C A A T G C C G A T A T C G C T G A G T A C
p-value:1e-9
log p-value:-2.246e+01
Information Content per bp:1.656
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.13%
Number of Background Sequences with motif787.4
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets49.9 +/- 25.2bp
Average Position of motif in Background50.6 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GTCASTGAAA--
NANTTCATTGAATTA
 A C G T A C G T A C G T C A T G G A C T A T G C G C T A T A C G C A G T A T C G T G C A G T C A G T C A A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GTCASTGAAA---
---ACTGAAACCA
 C A T G G A C T A T G C G C T A T A C G C A G T A T C G T G C A G T C A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTCASTGAAA--
GAAAGTGAAAGT
 C A T G G A C T A T G C G C T A T A C G C A G T A T C G T G C A G T C A G T C A A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCASTGAAA-
TTTCTNAGAAAN
 A C G T C A T G G A C T A T G C G C T A T A C G C A G T A T C G T G C A G T C A G T C A A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCASTGAAA-
TTCTTGGAAAN
 C A T G G A C T A T G C G C T A T A C G C A G T A T C G T G C A G T C A G T C A A C G T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCASTGAAA
SCTGTCAVTCAV-
 A C G T A C G T A C G T C A T G G A C T A T G C G C T A T A C G C A G T A T C G T G C A G T C A G T C A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCASTGAAA--
GAAAGTGAAAGT
 C A T G G A C T A T G C G C T A T A C G C A G T A T C G T G C A G T C A G T C A A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCASTGAAA--
GGAAGTGAAAST
 C A T G G A C T A T G C G C T A T A C G C A G T A T C G T G C A G T C A G T C A A C G T A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCASTGAAA----
CAATCACTGGCAGAAT
 A C G T A C G T C A T G G A C T A T G C G C T A T A C G C A G T A T C G T G C A G T C A G T C A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTCASTGAAA-
NAGGTCANTGACCT
 A C G T A C G T A C G T C A T G G A C T A T G C G C T A T A C G C A G T A T C G T G C A G T C A G T C A A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T