Information for 5-RCCCYCTAGCTGT (Motif 5)

C T G A A G T C A G T C G T A C A G C T A G T C A G C T C T G A A C T G A G T C A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A C T G A G T C G A C T C T G A A C T G C T G A A C T G A C T G A C T G G A C T
p-value:1e-13
log p-value:-3.076e+01
Information Content per bp:1.857
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif31.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.3 +/- 19.5bp
Average Position of motif in Background40.1 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:RCCCYCTAGCTGT--
-----CCAGCTGTTN
 C T G A A G T C A G T C G T A C A G C T A G T C A G C T C T G A A C T G A G T C A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:RCCCYCTAGCTGT-
---NNGCAGCTGTT
 C T G A A G T C A G T C G T A C A G C T A G T C A G C T C T G A A C T G A G T C A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:RCCCYCTAGCTGT-
------CAGCTGTT
 C T G A A G T C A G T C G T A C A G C T A G T C A G C T C T G A A C T G A G T C A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:RCCCYCTAGCTGT-
---NNGCAGCTGTC
 C T G A A G T C A G T C G T A C A G C T A G T C A G C T C T G A A C T G A G T C A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:RCCCYCTAGCTGT-
--CCCCCTGCTGTG
 C T G A A G T C A G T C G T A C A G C T A G T C A G C T C T G A A C T G A G T C A C G T A C T G A G C T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RCCCYCTAGCTGT--
GGCCYCCTGCTGDGH
 C T G A A G T C A G T C G T A C A G C T A G T C A G C T C T G A A C T G A G T C A C G T A C T G A G C T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.63
Offset:8
Orientation:forward strand
Alignment:RCCCYCTAGCTGT-
--------GCTGTG
 C T G A A G T C A G T C G T A C A G C T A G T C A G C T C T G A A C T G A G T C A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:RCCCYCTAGCTGT-
----TCCAGATGTT
 C T G A A G T C A G T C G T A C A G C T A G T C A G C T C T G A A C T G A G T C A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:RCCCYCTAGCTGT--
-----HCAGCTGDTN
 C T G A A G T C A G T C G T A C A G C T A G T C A G C T C T G A A C T G A G T C A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:RCCCYCTAGCTGT----
----TGCAGCTGTCCCT
 C T G A A G T C A G T C G T A C A G C T A G T C A G C T C T G A A C T G A G T C A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T