Information for 4-GGAGCAATGC (Motif 4)

T C A G T C A G G T C A C A T G A G T C T G C A G T C A G A C T A T C G T G A C
Reverse Opposite:
A C T G T A G C C T G A C A G T A C G T T C A G G T A C C A G T A G T C A G T C
p-value:1e-14
log p-value:-3.243e+01
Information Content per bp:1.648
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif10.42%
Number of Background Sequences with motif1987.2
Percentage of Background Sequences with motif4.18%
Average Position of motif in Targets50.8 +/- 24.2bp
Average Position of motif in Background50.7 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCAATGC---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T T C A G T C A G G T C A C A T G A G T C T G C A G T C A G A C T A T C G T G A C A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAATGC
CGGAGC-----
 A C G T T C A G T C A G G T C A C A T G A G T C T G C A G T C A G A C T A T C G T G A C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAATGC
GGGAGGACNG-
 A C G T T C A G T C A G G T C A C A T G A G T C T G C A G T C A G A C T A T C G T G A C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGAGCAATGC
-GAACAATGG
 T C A G T C A G G T C A C A T G A G T C T G C A G T C A G A C T A T C G T G A C
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAGCAATGC
VRAACAATGG
 T C A G T C A G G T C A C A T G A G T C T G C A G T C A G A C T A T C G T G A C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGAGCAATGC-
AGATGCAATCCC
 A C G T T C A G T C A G G T C A C A T G A G T C T G C A G T C A G A C T A T C G T G A C A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCAATGC---
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T T C A G T C A G G T C A C A T G A G T C T G C A G T C A G A C T A T C G T G A C A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAGCAATGC
GGAACAAAGR
 T C A G T C A G G T C A C A T G A G T C T G C A G T C A G A C T A T C G T G A C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAGCAATGC
DGATCRATAN
 T C A G T C A G G T C A C A T G A G T C T G C A G T C A G A C T A T C G T G A C
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGAGCAATGC-
-GAACAATGGN
 T C A G T C A G G T C A C A T G A G T C T G C A G T C A G A C T A T C G T G A C A C G T
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G