Information for 4-CTGGCACCACCTG (Motif 3)

G T A C A C G T C A T G T A C G A G T C C G T A A T G C A T G C G C T A A T G C A G T C A C G T A C T G
Reverse Opposite:
G T A C G T C A C T A G T A C G C G A T A T C G A T C G G C A T A C T G A T G C G A T C G T C A A C T G
p-value:1e-19
log p-value:-4.539e+01
Information Content per bp:1.760
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif100.9
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets48.0 +/- 23.0bp
Average Position of motif in Background55.5 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FIGLA/MA0820.1/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:CTGGCACCACCTG--
-----ACCACCTGTT
 G T A C A C G T C A T G T A C G A G T C C G T A A T G C A T G C G C T A A T G C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CTGGCACCACCTG--
-----NNCACCTGNN
 G T A C A C G T C A T G T A C G A G T C C G T A A T G C A T G C G C T A A T G C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

TCF3/MA0522.2/Jaspar

Match Rank:3
Score:0.67
Offset:5
Orientation:forward strand
Alignment:CTGGCACCACCTG--
-----AACACCTGCT
 G T A C A C G T C A T G T A C G A G T C C G T A A T G C A T G C G C T A A T G C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTGGCACCACCTG---
----SNGCACCTGCHS
 G T A C A C G T C A T G T A C G A G T C C G T A A T G C A T G C G C T A A T G C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CTGGCACCACCTG--
------NCACCTGTN
 G T A C A C G T C A T G T A C G A G T C C G T A A T G C A T G C G C T A A T G C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CTGGCACCACCTG--
-----CGCACCTGCT
 G T A C A C G T C A T G T A C G A G T C C G T A A T G C A T G C G C T A A T G C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCACCACCTG
SCTGTCARCACC--
 A C G T G T A C A C G T C A T G T A C G A G T C C G T A A T G C A T G C G C T A A T G C A G T C A C G T A C T G
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CTGGCACCACCTG
-----ACCACGTG
 G T A C A C G T C A T G T A C G A G T C C G T A A T G C A T G C G C T A A T G C A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CTGGCACCACCTG--
-----GCCATCTGTT
 G T A C A C G T C A T G T A C G A G T C C G T A A T G C A T G C G C T A A T G C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTGGCACCACCTG----
-----NVCAGCTGBBNN
 G T A C A C G T C A T G T A C G A G T C C G T A A T G C A T G C G C T A A T G C A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C