Information for 3-ACCGGCAGGT (Motif 2)

C T G A T A G C T G A C A T C G A C T G T A G C C T G A A C T G C T A G C G A T
Reverse Opposite:
G C T A A G T C T G A C A G C T A T C G T G A C T A G C A C T G A T C G G A C T
p-value:1e-23
log p-value:-5.435e+01
Information Content per bp:1.689
Number of Target Sequences with motif112.0
Percentage of Target Sequences with motif13.11%
Number of Background Sequences with motif2089.3
Percentage of Background Sequences with motif4.40%
Average Position of motif in Targets52.3 +/- 26.2bp
Average Position of motif in Background51.2 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:ACCGGCAGGT----
--SDGCAGGTGCNS
 C T G A T A G C T G A C A T C G A C T G T A G C C T G A A C T G C T A G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:ACCGGCAGGT--
---AACAGGTGT
 C T G A T A G C T G A C A T C G A C T G T A G C C T G A A C T G C T A G C G A T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:ACCGGCAGGT---
---NNCAGGTGNN
 C T G A T A G C T G A C A T C G A C T G T A G C C T G A A C T G C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.71
Offset:4
Orientation:forward strand
Alignment:ACCGGCAGGT----
----VCAGGTRDRY
 C T G A T A G C T G A C A T C G A C T G T A G C C T G A A C T G C T A G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:ACCGGCAGGT---
---GACAGGTGTN
 C T G A T A G C T G A C A T C G A C T G T A G C C T G A A C T G C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ACCGGCAGGT---
---NNCAGGTGCG
 C T G A T A G C T G A C A T C G A C T G T A G C C T G A A C T G C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACCGGCAGGT---
---NNCAGGTGTN
 C T G A T A G C T G A C A T C G A C T G T A G C C T G A A C T G C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:ACCGGCAGGT----
-----CAGGTGAGG
 C T G A T A G C T G A C A T C G A C T G T A G C C T G A A C T G C T A G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACCGGCAGGT
ACCGGAAG--
 C T G A T A G C T G A C A T C G A C T G T A G C C T G A A C T G C T A G C G A T
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ACCGGCAGGT--
-AAGGCAAGTGT
 C T G A T A G C T G A C A T C G A C T G T A G C C T G A A C T G C T A G C G A T A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T