p-value: | 1e-13 |
log p-value: | -3.154e+01 |
Information Content per bp: | 1.777 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 0.90% |
Number of Background Sequences with motif | 4.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 49.6 +/- 17.9bp |
Average Position of motif in Background | 56.1 +/- 21.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | TGGHABCTAGAGGRCA --------TRAGGTCA |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | TGGHABCTAGAGGRCA --------AGRGGTCA |
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PB0118.1_Esrra_2/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TGGHABCTAGAGGRCA----- ----GGCGAGGGGTCAAGGGC |
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LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGHABCTAGAGGRCA GGGTTACTANAGGTCA |
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CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGHABCTAGAGGRCA---- TGGCCACCAGGTGGCACTNT |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | TGGHABCTAGAGGRCA- -------CAAAGGTCAG |
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CTCF/MA0139.1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGHABCTAGAGGRCA--- TGGCCACCAGGGGGCGCTA |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | TGGHABCTAGAGGRCA- ---------AAGGTCAC |
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Nr1h3::Rxra/MA0494.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGGHABCTAGAGGRCA NNGAGGTTACTNNAGGTCA |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TGGHABCTAGAGGRCA---- ----TCTCAAAGGTCACGAG |
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