Information for 6-TTTATGTCTC (Motif 17)

A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A G T C C G T A A C G T C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.480e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.5 +/- 19.0bp
Average Position of motif in Background62.4 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGTCTC
TTTTATGGCTN
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A G T C
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATGTCTC-
NGANTTTTATGGCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A G T C A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGTCTC
NTTTTATGAC--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A G T C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTATGTCTC
DGWTTTATGRCN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A G T C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGTCTC
TTTTATTGC--
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A G T C
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGTCTC--
NAATTTTATTACCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

HOXA10/MA0899.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGTCTC
NTTTTATTACN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A G T C
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGTCTC--
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0056.1_Hoxa9/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTTATGTCTC-
ANTAATTTTATGGCCGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A G T C A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGTCTC
NTTTTACGAC--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A G T C
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T