Information for 13-TTCCATTTGAAAT (Motif 15)

A C G T A C G T G A T C A G T C G C T A A C G T G A C T A C G T T A C G C G T A G T C A C G T A A C G T
Reverse Opposite:
G T C A C G A T A C G T G A C T A T G C G T C A C T G A C G T A C A G T C T A G C T A G G T C A C G T A
p-value:1e-7
log p-value:-1.784e+01
Information Content per bp:1.769
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif72.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets60.3 +/- 28.5bp
Average Position of motif in Background52.9 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:TTCCATTTGAAAT--
-----TTTGAAACCG
 A C G T A C G T G A T C A G T C G C T A A C G T G A C T A C G T T A C G C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TTCCATTTGAAAT
----ATTTGAATT
 A C G T A C G T G A T C A G T C G C T A A C G T G A C T A C G T T A C G C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTCCATTTGAAAT
---CCTTTGATGT
 A C G T A C G T G A T C A G T C G C T A A C G T G A C T A C G T T A C G C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTCCATTTGAAAT
---CCTTTGAWGT
 A C G T A C G T G A T C A G T C G C T A A C G T G A C T A C G T T A C G C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTCCATTTGAAAT-
TAAGCCACTTGAATTT
 A C G T A C G T A C G T A C G T G A T C A G T C G C T A A C G T G A C T A C G T T A C G C G T A G T C A C G T A A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCCATTTGAAAT---
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T G A T C A G T C G C T A A C G T G A C T A C G T T A C G C G T A G T C A C G T A A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTCCATTTGAAAT
-TNCCTTTGATGT
 A C G T A C G T G A T C A G T C G C T A A C G T G A C T A C G T T A C G C G T A G T C A C G T A A C G T
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTCCATTTGAAAT--
-TNCCTTTGATCTTN
 A C G T A C G T G A T C A G T C G C T A A C G T G A C T A C G T T A C G C G T A G T C A C G T A A C G T A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTCCATTTGAAAT--
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T G A T C A G T C G C T A A C G T G A C T A C G T T A C G C G T A G T C A C G T A A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTCCATTTGAAAT---
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T G A T C A G T C G C T A A C G T G A C T A C G T T A C G C G T A G T C A C G T A A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A