Information for 3-TAGGAGGCGM (Motif 8)

C G A T C T G A A C T G T A C G C G T A C A T G A T C G T A G C C T A G T G C A
Reverse Opposite:
A C G T A G T C A T C G A T G C G T A C G C A T A T G C G T A C A G C T C G T A
p-value:1e-11
log p-value:-2.697e+01
Information Content per bp:1.680
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif208.1
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets48.6 +/- 24.5bp
Average Position of motif in Background48.5 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TAGGAGGCGM----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T C G A T C T G A A C T G T A C G C G T A C A T G A T C G T A G C C T A G T G C A A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TAGGAGGCGM-
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C T G T A C G C G T A C A T G A T C G T A G C C T A G T G C A A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TAGGAGGCGM-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C T G T A C G C G T A C A T G A T C G T A G C C T A G T G C A A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------TAGGAGGCGM--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C T G T A C G C G T A C A T G A T C G T A G C C T A G T G C A A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TAGGAGGCGM---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T C G A T C T G A A C T G T A C G C G T A C A T G A T C G T A G C C T A G T G C A A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------TAGGAGGCGM---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C T G T A C G C G T A C A T G A T C G T A G C C T A G T G C A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAGGAGGCGM
TGTCAGGGGGCG-
 A C G T A C G T A C G T C G A T C T G A A C T G T A C G C G T A C A T G A T C G T A G C C T A G T G C A
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAGGAGGCGM--
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T C G A T C T G A A C T G T A C G C G T A C A T G A T C G T A G C C T A G T G C A A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TAGGAGGCGM
-AGGTGTCA-
 C G A T C T G A A C T G T A C G C G T A C A T G A T C G T A G C C T A G T G C A
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

KLF14/MA0740.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAGGAGGCGM----
AAGGGGGCGTGGCC
 C G A T C T G A A C T G T A C G C G T A C A T G A T C G T A G C C T A G T G C A A C G T A C G T A C G T A C G T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C