p-value: | 1e-12 |
log p-value: | -2.992e+01 |
Information Content per bp: | 1.759 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.18% |
Number of Background Sequences with motif | 13.4 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 44.0 +/- 24.5bp |
Average Position of motif in Background | 43.3 +/- 23.2bp |
Strand Bias (log2 ratio + to - strand density) | -1.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TCCTTKCYGGCTGBKK ------CTGTCTGG-- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TCCTTKCYGGCTGBKK ----VBSYGTCTGG-- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 3 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCCTTKCYGGCTGBKK GTCATGCHTGRCTGS-- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TCCTTKCYGGCTGBKK ------TWGTCTGV-- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TCCTTKCYGGCTGBKK--- --NNTNNTGTCTGGNNTNG |
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PB0137.1_Irf3_2/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TCCTTKCYGGCTGBKK NNGCACCTTTCTCC------ |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 7 |
Score: | 0.50 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCCTTKCYGGCTGBKK CCCCCTGCTGTG----- |
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E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCCTTKCYGGCTGBKK ---TTCCCGCCWG--- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TCCTTKCYGGCTGBKK --CTGTCTGTCACCT- |
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MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer
Match Rank: | 10 |
Score: | 0.50 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TCCTTKCYGGCTGBKK ----TGCTGACTCA-- |
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