Information for 2-SGSCACGTGB (Motif 3)

A T G C C A T G T A G C A T G C C T G A A T G C T A C G G A C T A C T G A T C G
Reverse Opposite:
T A G C T G A C C T G A A T G C T A C G G A C T A T C G A T C G G T A C T A C G
p-value:1e-15
log p-value:-3.516e+01
Information Content per bp:1.569
Number of Target Sequences with motif307.0
Percentage of Target Sequences with motif36.33%
Number of Background Sequences with motif11265.9
Percentage of Background Sequences with motif23.94%
Average Position of motif in Targets52.3 +/- 25.5bp
Average Position of motif in Background50.4 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:SGSCACGTGB
NNCCACGTGG
 A T G C C A T G T A G C A T G C C T G A A T G C T A C G G A C T A C T G A T C G
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.91
Offset:0
Orientation:forward strand
Alignment:SGSCACGTGB
NNCCACGTGG
 A T G C C A T G T A G C A T G C C T G A A T G C T A C G G A C T A C T G A T C G
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:3
Score:0.90
Offset:1
Orientation:forward strand
Alignment:SGSCACGTGB
-ACCACGTG-
 A T G C C A T G T A G C A T G C C T G A A T G C T A C G G A C T A C T G A T C G
A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.90
Offset:1
Orientation:forward strand
Alignment:SGSCACGTGB
-GCCACGTG-
 A T G C C A T G T A G C A T G C C T G A A T G C T A C G G A C T A C T G A T C G
A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.90
Offset:1
Orientation:forward strand
Alignment:SGSCACGTGB---
-ACCACGTGGTNN
 A T G C C A T G T A G C A T G C C T G A A T G C T A C G G A C T A C T G A T C G A C G T A C G T A C G T
A C G T T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.90
Offset:1
Orientation:forward strand
Alignment:SGSCACGTGB
-GNCACGTG-
 A T G C C A T G T A G C A T G C C T G A A T G C T A C G G A C T A C T G A T C G
A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T

MAX/MA0058.3/Jaspar

Match Rank:7
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:SGSCACGTGB-
-NNCACGTGGT
 A T G C C A T G T A G C A T G C C T G A A T G C T A C G G A C T A C T G A T C G A C G T
A C G T C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T

MNT/MA0825.1/Jaspar

Match Rank:8
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:SGSCACGTGB-
-NGCACGTGNT
 A T G C C A T G T A G C A T G C C T G A A T G C T A C G G A C T A C T G A T C G A C G T
A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.88
Offset:1
Orientation:forward strand
Alignment:SGSCACGTGB
-NCCACGTG-
 A T G C C A T G T A G C A T G C C T G A A T G C T A C G G A C T A C T G A T C G
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.88
Offset:1
Orientation:forward strand
Alignment:SGSCACGTGB
-GHCACGTG-
 A T G C C A T G T A G C A T G C C T G A A T G C T A C G G A C T A C T G A T C G
A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T