Information for 5-ATCTGCCTTTGCTGGG (Motif 12)

C G T A A G C T A T G C C G A T A C T G G T A C G T A C C G A T A C G T A G C T A C T G G T A C G A C T C T A G A C T G C T A G
Reverse Opposite:
A G T C G T A C A G T C C T G A A C T G A G T C C T G A C G T A G C T A A C T G A C T G A G T C C G T A A T C G C T G A A C G T
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.804
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.2 +/- 22.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ATCTGCCTTTGCTGGG---
----NCCGTTGCTANGNGN
 C G T A A G C T A T G C C G A T A C T G G T A C G T A C C G A T A C G T A G C T A C T G G T A C G A C T C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATCTGCCTTTGCTGGG---
----NNCGTTGCTATGGNN
 C G T A A G C T A T G C C G A T A C T G G T A C G T A C C G A T A C G T A G C T A C T G G T A C G A C T C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATCTGCCTTTGCTGGG-
--GGGGCTYGKCTGGGA
 C G T A A G C T A T G C C G A T A C T G G T A C G T A C C G A T A C G T A G C T A C T G G T A C G A C T C T A G A C T G C T A G A C G T
A C G T A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ATCTGCCTTTGCTGGG-
-----CTGTTGCTAGGS
 C G T A A G C T A T G C C G A T A C T G G T A C G T A C C G A T A C G T A G C T A C T G G T A C G A C T C T A G A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ATCTGCCTTTGCTGGG
-----CCTTTGTT---
 C G T A A G C T A T G C C G A T A C T G G T A C G T A C C G A T A C G T A G C T A C T G G T A C G A C T C T A G A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:ATCTGCCTTTGCTGGG
---TNCCTTTGATGT-
 C G T A A G C T A T G C C G A T A C T G G T A C G T A C C G A T A C G T A G C T A C T G G T A C G A C T C T A G A C T G C T A G
A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ATCTGCCTTTGCTGGG-------
NTNNNNNGTTGCTANGGNNCANA
 C G T A A G C T A T G C C G A T A C T G G T A C G T A C C G A T A C G T A G C T A C T G G T A C G A C T C T A G A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--ATCTGCCTTTGCTGGG
NNACTTGCCTT-------
 A C G T A C G T C G T A A G C T A T G C C G A T A C T G G T A C G T A C C G A T A C G T A G C T A C T G G T A C G A C T C T A G A C T G C T A G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ATCTGCCTTTGCTGGG
-BNTGDCCTTG-----
 C G T A A G C T A T G C C G A T A C T G G T A C G T A C C G A T A C G T A G C T A C T G G T A C G A C T C T A G A C T G C T A G
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:ATCTGCCTTTGCTGGG
-----CCWTTGTY---
 C G T A A G C T A T G C C G A T A C T G G T A C G T A C C G A T A C G T A G C T A C T G G T A C G A C T C T A G A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T