Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-52 | -1.206e+02 | 0.0000 | 80.0 | 9.23% | 281.9 | 0.90% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-33 | -7.601e+01 | 0.0000 | 78.0 | 9.00% | 502.3 | 1.60% | motif file (matrix) |
svg |
3 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-14 | -3.416e+01 | 0.0000 | 169.0 | 19.49% | 3270.9 | 10.41% | motif file (matrix) |
svg |
4 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-12 | -2.942e+01 | 0.0000 | 107.0 | 12.34% | 1802.1 | 5.73% | motif file (matrix) |
svg |
5 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-11 | -2.554e+01 | 0.0000 | 172.0 | 19.84% | 3709.3 | 11.80% | motif file (matrix) |
svg |
6 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-9 | -2.116e+01 | 0.0000 | 75.0 | 8.65% | 1252.2 | 3.99% | motif file (matrix) |
svg |
7 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-9 | -2.085e+01 | 0.0000 | 42.0 | 4.84% | 510.5 | 1.62% | motif file (matrix) |
svg |
8 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.075e+01 | 0.0000 | 82.0 | 9.46% | 1439.3 | 4.58% | motif file (matrix) |
svg |
9 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-8 | -2.024e+01 | 0.0000 | 86.0 | 9.92% | 1558.6 | 4.96% | motif file (matrix) |
svg |
10 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-8 | -2.002e+01 | 0.0000 | 30.0 | 3.46% | 293.5 | 0.93% | motif file (matrix) |
svg |
11 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-8 | -1.851e+01 | 0.0000 | 34.0 | 3.92% | 390.7 | 1.24% | motif file (matrix) |
svg |
12 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-7 | -1.811e+01 | 0.0000 | 42.0 | 4.84% | 562.6 | 1.79% | motif file (matrix) |
svg |
13 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-7 | -1.762e+01 | 0.0000 | 43.0 | 4.96% | 594.9 | 1.89% | motif file (matrix) |
svg |
14 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-7 | -1.751e+01 | 0.0000 | 114.0 | 13.15% | 2425.9 | 7.72% | motif file (matrix) |
svg |
15 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-7 | -1.743e+01 | 0.0000 | 209.0 | 24.11% | 5281.5 | 16.81% | motif file (matrix) |
svg |
16 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.616e+01 | 0.0000 | 49.0 | 5.65% | 765.1 | 2.43% | motif file (matrix) |
svg |
17 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-6 | -1.594e+01 | 0.0000 | 37.0 | 4.27% | 499.7 | 1.59% | motif file (matrix) |
svg |
18 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-6 | -1.503e+01 | 0.0000 | 42.0 | 4.84% | 631.0 | 2.01% | motif file (matrix) |
svg |
19 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-6 | -1.439e+01 | 0.0000 | 72.0 | 8.30% | 1403.6 | 4.47% | motif file (matrix) |
svg |
20 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-6 | -1.420e+01 | 0.0000 | 61.0 | 7.04% | 1121.7 | 3.57% | motif file (matrix) |
svg |
21 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-5 | -1.305e+01 | 0.0000 | 6.0 | 0.69% | 13.7 | 0.04% | motif file (matrix) |
svg |
22 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.238e+01 | 0.0001 | 266.0 | 30.68% | 7538.9 | 23.99% | motif file (matrix) |
svg |
23 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-5 | -1.224e+01 | 0.0001 | 6.0 | 0.69% | 15.1 | 0.05% | motif file (matrix) |
svg |
24 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-5 | -1.189e+01 | 0.0001 | 218.0 | 25.14% | 5997.5 | 19.09% | motif file (matrix) |
svg |
25 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-4 | -1.093e+01 | 0.0003 | 23.0 | 2.65% | 301.3 | 0.96% | motif file (matrix) |
svg |
26 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-4 | -1.066e+01 | 0.0003 | 26.0 | 3.00% | 372.9 | 1.19% | motif file (matrix) |
svg |
27 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.050e+01 | 0.0004 | 161.0 | 18.57% | 4278.2 | 13.61% | motif file (matrix) |
svg |
28 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.038e+01 | 0.0004 | 7.0 | 0.81% | 31.1 | 0.10% | motif file (matrix) |
svg |
29 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-4 | -9.954e+00 | 0.0006 | 33.0 | 3.81% | 554.3 | 1.76% | motif file (matrix) |
svg |
30 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-4 | -9.596e+00 | 0.0008 | 18.0 | 2.08% | 222.0 | 0.71% | motif file (matrix) |
svg |
31 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-4 | -9.516e+00 | 0.0009 | 35.0 | 4.04% | 617.3 | 1.96% | motif file (matrix) |
svg |
32 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-3 | -8.710e+00 | 0.0019 | 33.0 | 3.81% | 593.1 | 1.89% | motif file (matrix) |
svg |
33 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-3 | -8.586e+00 | 0.0021 | 27.0 | 3.11% | 448.3 | 1.43% | motif file (matrix) |
svg |
34 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.374e+00 | 0.0025 | 24.0 | 2.77% | 382.7 | 1.22% | motif file (matrix) |
svg |
35 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-3 | -8.331e+00 | 0.0025 | 25.0 | 2.88% | 407.8 | 1.30% | motif file (matrix) |
svg |
36 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-3 | -8.229e+00 | 0.0027 | 29.0 | 3.34% | 508.6 | 1.62% | motif file (matrix) |
svg |
37 |
| OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer | 1e-3 | -8.226e+00 | 0.0027 | 5.0 | 0.58% | 20.8 | 0.07% | motif file (matrix) |
svg |
38 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-3 | -8.018e+00 | 0.0032 | 117.0 | 13.49% | 3091.4 | 9.84% | motif file (matrix) |
svg |
39 |
| p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer | 1e-3 | -7.615e+00 | 0.0045 | 10.0 | 1.15% | 98.4 | 0.31% | motif file (matrix) |
svg |
40 |
| p53(p53)/Saos-p53-ChIP-Seq/Homer | 1e-3 | -7.615e+00 | 0.0045 | 10.0 | 1.15% | 98.4 | 0.31% | motif file (matrix) |
svg |
41 |
| Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.247e+00 | 0.0063 | 160.0 | 18.45% | 4546.3 | 14.47% | motif file (matrix) |
svg |
42 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -6.857e+00 | 0.0091 | 71.0 | 8.19% | 1758.8 | 5.60% | motif file (matrix) |
svg |
43 |
| YY1(Zf)/Promoter/Homer | 1e-2 | -6.857e+00 | 0.0091 | 12.0 | 1.38% | 148.1 | 0.47% | motif file (matrix) |
svg |
44 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.734e+00 | 0.0098 | 140.0 | 16.15% | 3946.8 | 12.56% | motif file (matrix) |
svg |
45 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.695e+00 | 0.0100 | 39.0 | 4.50% | 834.0 | 2.65% | motif file (matrix) |
svg |
46 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -6.380e+00 | 0.0134 | 88.0 | 10.15% | 2317.7 | 7.38% | motif file (matrix) |
svg |
47 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -6.323e+00 | 0.0139 | 73.0 | 8.42% | 1857.0 | 5.91% | motif file (matrix) |
svg |
48 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.941e+00 | 0.0199 | 64.0 | 7.38% | 1610.8 | 5.13% | motif file (matrix) |
svg |
49 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.925e+00 | 0.0199 | 161.0 | 18.57% | 4727.8 | 15.05% | motif file (matrix) |
svg |
50 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -5.875e+00 | 0.0205 | 97.0 | 11.19% | 2645.8 | 8.42% | motif file (matrix) |
svg |
51 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.791e+00 | 0.0218 | 45.0 | 5.19% | 1052.5 | 3.35% | motif file (matrix) |
svg |
52 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-2 | -5.713e+00 | 0.0231 | 101.0 | 11.65% | 2788.5 | 8.87% | motif file (matrix) |
svg |
53 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -5.704e+00 | 0.0231 | 80.0 | 9.23% | 2123.3 | 6.76% | motif file (matrix) |
svg |
54 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.658e+00 | 0.0235 | 61.0 | 7.04% | 1539.2 | 4.90% | motif file (matrix) |
svg |
55 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.624e+00 | 0.0239 | 28.0 | 3.23% | 578.4 | 1.84% | motif file (matrix) |
svg |
56 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.613e+00 | 0.0239 | 154.0 | 17.76% | 4532.2 | 14.42% | motif file (matrix) |
svg |
57 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.595e+00 | 0.0239 | 7.0 | 0.81% | 70.7 | 0.22% | motif file (matrix) |
svg |
58 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.561e+00 | 0.0241 | 61.0 | 7.04% | 1547.0 | 4.92% | motif file (matrix) |
svg |
59 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.504e+00 | 0.0251 | 38.0 | 4.38% | 865.0 | 2.75% | motif file (matrix) |
svg |
60 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.503e+00 | 0.0251 | 77.0 | 8.88% | 2046.6 | 6.51% | motif file (matrix) |
svg |
61 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-2 | -5.490e+00 | 0.0251 | 56.0 | 6.46% | 1399.0 | 4.45% | motif file (matrix) |
svg |
62 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.485e+00 | 0.0251 | 219.0 | 25.26% | 6743.4 | 21.46% | motif file (matrix) |
svg |
63 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.420e+00 | 0.0256 | 5.0 | 0.58% | 38.3 | 0.12% | motif file (matrix) |
svg |
64 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.410e+00 | 0.0256 | 68.0 | 7.84% | 1773.9 | 5.65% | motif file (matrix) |
svg |
65 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-2 | -5.410e+00 | 0.0256 | 35.0 | 4.04% | 784.6 | 2.50% | motif file (matrix) |
svg |
66 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -5.168e+00 | 0.0314 | 18.0 | 2.08% | 330.6 | 1.05% | motif file (matrix) |
svg |
67 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -5.142e+00 | 0.0318 | 13.0 | 1.50% | 207.2 | 0.66% | motif file (matrix) |
svg |
68 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -5.105e+00 | 0.0325 | 19.0 | 2.19% | 358.1 | 1.14% | motif file (matrix) |
svg |
69 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.078e+00 | 0.0329 | 4.0 | 0.46% | 26.9 | 0.09% | motif file (matrix) |
svg |
70 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -5.075e+00 | 0.0329 | 27.0 | 3.11% | 575.7 | 1.83% | motif file (matrix) |
svg |
71 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -4.971e+00 | 0.0356 | 17.0 | 1.96% | 311.3 | 0.99% | motif file (matrix) |
svg |
72 |
| NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-2 | -4.892e+00 | 0.0379 | 7.0 | 0.81% | 80.5 | 0.26% | motif file (matrix) |
svg |
73 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.883e+00 | 0.0379 | 6.0 | 0.69% | 61.3 | 0.20% | motif file (matrix) |
svg |
74 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -4.830e+00 | 0.0393 | 10.0 | 1.15% | 145.2 | 0.46% | motif file (matrix) |
svg |
75 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -4.828e+00 | 0.0393 | 64.0 | 7.38% | 1696.2 | 5.40% | motif file (matrix) |
svg |
76 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-2 | -4.765e+00 | 0.0408 | 66.0 | 7.61% | 1764.8 | 5.62% | motif file (matrix) |
svg |
77 |
| Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer | 1e-2 | -4.735e+00 | 0.0415 | 32.0 | 3.69% | 734.7 | 2.34% | motif file (matrix) |
svg |
78 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.675e+00 | 0.0435 | 132.0 | 15.22% | 3917.8 | 12.47% | motif file (matrix) |
svg |
79 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -4.627e+00 | 0.0451 | 31.0 | 3.58% | 711.4 | 2.26% | motif file (matrix) |
svg |