Information for 2-GAGCACACCGAGC (Motif 4)

A C T G C G T A A C T G G T A C C G T A A G T C C G T A A G T C G T A C A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G G T A C C G A T A G T C C A T G A C T G A C G T A C T G A C G T A C T G A G T C A C G T A G T C
p-value:1e-14
log p-value:-3.371e+01
Information Content per bp:1.941
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.3 +/- 24.6bp
Average Position of motif in Background82.6 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGCACACCGAGC
GCGACCACACTG---
 A C G T A C G T A C T G C G T A A C T G G T A C C G T A A G T C C G T A A G T C G T A C A C T G C G T A A C T G A G T C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCACACCGAGC
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G G T A C C G T A A G T C C G T A A G T C G T A C A C T G C G T A A C T G A G T C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGCACACCGAGC
GGCCACACCCAN-
 A C T G C G T A A C T G G T A C C G T A A G T C C G T A A G T C G T A C A C T G C G T A A C T G A G T C
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGCACACCGAGC
GGCCACACCCA--
 A C T G C G T A A C T G G T A C C G T A A G T C C G T A A G T C G T A C A C T G C G T A A C T G A G T C
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GAGCACACCGAGC
NTNTATGTGCACATNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G G T A C C G T A A G T C C G T A A G T C G T A C A C T G C G T A A C T G A G T C
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGCACACCGAGC
GGGAGGACNG-----
 A C G T A C G T A C T G C G T A A C T G G T A C C G T A A G T C C G T A A G T C G T A C A C T G C G T A A C T G A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGCACACCGAGC-
CGAAGCACACAAAATA
 A C G T A C G T A C T G C G T A A C T G G T A C C G T A A G T C C G T A A G T C G T A C A C T G C G T A A C T G A G T C A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGCACACCGAGC
CCAGGAACAG-----
 A C G T A C G T A C T G C G T A A C T G G T A C C G T A A G T C C G T A A G T C G T A C A C T G C G T A A C T G A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGCACACCGAGC
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C T G C G T A A C T G G T A C C G T A A G T C C G T A A G T C G T A C A C T G C G T A A C T G A G T C
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GAGCACACCGAGC
---GAGSCCGAGC
 A C T G C G T A A C T G G T A C C G T A A G T C C G T A A G T C G T A C A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C