Information for 19-GCACGTRACACCT (Motif 28)

A C T G A T G C C G T A A T G C A C T G A C G T C T A G G T C A G T A C C G T A A T G C A G T C A G C T
Reverse Opposite:
C T G A A C T G A T C G A C G T A C T G A C G T G A C T C G T A A G T C A T C G C G A T A T C G A G T C
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.835
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.6 +/- 23.8bp
Average Position of motif in Background31.9 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:GCACGTRACACCT
-----TGACACCT
 A C T G A T G C C G T A A T G C A C T G A C G T C T A G G T C A G T A C C G T A A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCACGTRACACCT
NCACGTGACN---
 A C T G A T G C C G T A A T G C A C T G A C G T C T A G G T C A G T A C C G T A A T G C A G T C A G C T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:3
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:GCACGTRACACCT
-----TCACACCT
 A C T G A T G C C G T A A T G C A C T G A C G T C T A G G T C A G T A C C G T A A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:GCACGTRACACCT
-----TCACACCT
 A C T G A T G C C G T A A T G C A C T G A C G T C T A G G T C A G T A C C G T A A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCACGTRACACCT
GGCACGTGNC----
 A C G T A C T G A T G C C G T A A T G C A C T G A C G T C T A G G T C A G T A C C G T A A T G C A G T C A G C T
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCACGTRACACCT
ATCACGTGAC----
 A C G T A C T G A T G C C G T A A T G C A C T G A C G T C T A G G T C A G T A C C G T A A T G C A G T C A G C T
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCACGTRACACCT
BGCACGTA------
 A C G T A C T G A T G C C G T A A T G C A C T G A C G T C T A G G T C A G T A C C G T A A T G C A G T C A G C T
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCACGTRACACCT
GCACGTGA-----
 A C T G A T G C C G T A A T G C A C T G A C G T C T A G G T C A G T A C C G T A A T G C A G T C A G C T
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GCACGTRACACCT
-----TCACACCT
 A C T G A T G C C G T A A T G C A C T G A C G T C T A G G T C A G T A C C G T A A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GCACGTRACACCT
-----TCACACCT
 A C T G A T G C C G T A A T G C A C T G A C G T C T A G G T C A G T A C C G T A A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T